test_EZTraits

echo TEST 1 - Simple

./EZTraitsCSV -i data/sample.calls -lua scripts/test.lua -rs rsid -pos pos -call call
echo

echo TEST 2 - lactose tolerance/intolerance

./EZTraitsCSV -i data/sample.calls -lua scripts/lactose.lua -rs rsid -pos pos -call call
echo

rm scripts/lactose_temp.lua
rm scripts/fructose_temp.lua

echo TEST 3 - lactose tolerance/intolerance, from text

./Txt2Lua -i scripts/lactose.txt > scripts/lactose_temp.lua
./EZTraitsCSV -i data/sample.calls -lua scripts/lactose_temp.lua -rs rsid -pos pos -call call
echo

echo TEST 4 - fructose intolerance

./EZTraitsCSV -i data/sample.calls -lua scripts/fructose.lua -rs rsid -pos pos -call call
echo

echo TEST 5 - fructose intolerance, from text

./Txt2Lua -i scripts/fructose.txt > scripts/fructose_temp.lua
./EZTraitsCSV -i data/sample.calls -lua scripts/fructose_temp.lua -rs rsid -pos pos -call call