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perf: bump datavzrd wrapper to 2.6.0 and general bug fixes #80

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merged 2 commits into from
Sep 1, 2023

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manuelphilip
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Created a new and separate pull request previously was merged with 3-prime-rna branch

@manuelphilip manuelphilip changed the title perf bump datavzrd wrapper to 2.6.0 and general bug fixes perf: bump datavzrd wrapper to 2.6.0 and general bug fixes Sep 1, 2023
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This looks straightforward to me. Thanks for creating the cleaner pull request, to replace #79 with lots of unrelated commits in it.

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Also, I added another pull request, namely to:

  1. Make release please happy. It previously gave this error about the commit message of the only commit:
Error: Pull request has only one commit and it's not semantic; this may lead to a non-semantic commit in the base branch (see https://gh.neting.ccmunity/t/how-to-change-the-default-squash-merge-commit-message/1155). Amend the commit message to match the pull request title, or add another commit.
  1. Also make the formatting step of the CI happy. So generally, running snakefmt workflow/ on a branch when creating a pull request makes sense, as otherwise the formatting step will very often complain.

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manuelphilip commented Sep 1, 2023

Yeah, Actually I was searching for this error message that came previously. Can you point me to the change
that you made to resolve this error?

Yea, I have the extension installed in my vscode for snakefmt format. But forgot to run it before pushing :(

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Just click on the commit snakefmt, which is listed above my last comment. So all I did was run snakefmt workflow/ locally, commit it via git to this branch and push it here.

@dlaehnemann dlaehnemann merged commit 657c465 into main Sep 1, 2023
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@dlaehnemann dlaehnemann deleted the datavzrd-2-6-0-and-plot-dimensions branch September 1, 2023 09:57
johanneskoester pushed a commit that referenced this pull request Jan 9, 2024
🤖 I have created a release *beep* *boop*
---


##
[2.5.2](v2.5.1...v2.5.2)
(2023-09-14)


### Bug Fixes

* simpler three prime QuantSeq cutadapt setup
([#78](#78))
([ecc9ab7](ecc9ab7))
* update samtools.yaml to latest `1.17` and update github actions
([#75](#75))
([0fe7948](0fe7948))


### Performance Improvements

* bump datavzrd wrapper to 2.6.0 and general bug fixes
([#80](#80))
([657c465](657c465))

---
This PR was generated with [Release
Please](https://github.com/googleapis/release-please). See
[documentation](https://github.com/googleapis/release-please#release-please).

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
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2 participants