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fix: fix quoting of string arguments that are passed to spawned jobs #60

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merged 7 commits into from
Mar 21, 2024

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johanneskoester
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@cmeesters
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cmeesters commented Mar 21, 2024

I tried a poetry install to test on a life cluster, but:

Because snakemake-interface-executor-plugins depends on snakemake (8.5.3) @ git+https://github.com/snakemake/snakemake.git which depends on snakemake-interface-executor-plugins (>=8.1.3,<9.0), snakemake-interface-executor-plugins is required.
So, because snakemake-interface-executor-plugins is 9.0.0, version solving failed.

@johanneskoester
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Looks like your poetry installation still has an old snakemake git dependency locked. Maybe do something like poetry clean.

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fine after mini formatting fix

@cmeesters cmeesters merged commit d3d55a3 into main Mar 21, 2024
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@cmeesters cmeesters deleted the fix/quoting branch March 21, 2024 15:54
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2 participants