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i couldn't find docs for the ANI columns in the sourmash gather output #2367

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taylorreiter opened this issue Nov 17, 2022 · 1 comment · Fixed by #2954
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i couldn't find docs for the ANI columns in the sourmash gather output #2367

taylorreiter opened this issue Nov 17, 2022 · 1 comment · Fixed by #2954
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@taylorreiter
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These ones:

query_containment_ani
match_containment_ani
average_containment_ani
max_containment_ani
potential_false_negative

I searched github but couldn't find it in this repo...I may have missed something, do these docs exist anywhere?

@taylorreiter
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I wrote these...sorry for the weird formatting:

#'   \item{query_containment_ani}{Numeric. Containment between the query and the match.}
#'   \item{match_containment_ani}{Numeric. Containment between the match and the query.}
#'   \item{average_containment_ani}{Numeric. Average of the two containment metrics query_containment_ani and match_containment_ani.}
#'   \item{max_containment_ani}{Numeric. Maximum containment between the two containment metrics query_containment_ani and match_containment_ani.}
#'   \item{potential_false_negative}{Logical. Whether the containment estimate is a potential false negative.}

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