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When importing SOFA and h5py Python throws:
` UserWarning: h5py is running against HDF5 1.12.1 when it was built against 1.12.2, this may cause problems
_warn(("h5py is running against HDF5 {0} when it was built against {1}, "
Warning! HDF5 library version mismatched error
The HDF5 header files used to compile this application do not match
the version used by the HDF5 library to which this application is linked.
Data corruption or segmentation faults may occur if the application continues.
This can happen when an application was compiled by one version of HDF5 but
linked with a different version of static or shared HDF5 library.
You should recompile the application or check your shared library related
settings such as 'LD_LIBRARY_PATH'.
You can, at your own risk, disable this warning by setting the environment
variable 'HDF5_DISABLE_VERSION_CHECK' to a value of '1'.
Setting it to 2 or higher will suppress the warning messages totally.
Headers are 1.12.2, library is 1.12.1
SUMMARY OF THE HDF5 CONFIGURATION
=================================
Build Mode: RELEASE
Debugging Symbols: OFF
Asserts: OFF
Profiling: OFF
Optimization Level: OFF
Linking Options:
Libraries:
Statically Linked Executables: OFF
LDFLAGS: /machine:x64
H5_LDFLAGS:
AM_LDFLAGS:
Extra libraries: D:/bld/hdf5_split_1646412547396/_h_env/Library/lib/libcurl.lib;D:/bld/hdf5_split_1646412547396/_h_env/Library/lib/libssl.lib;D:/bld/hdf5_split_1646412547396/_h_env/Library/lib/libcrypto.lib
Archiver: C:/Program Files (x86)/Microsoft Visual Studio/2019/Enterprise/VC/Tools/MSVC/14.16.27023/bin/HostX64/x64/lib.exe
Ranlib: :
Languages:
C: YES
C Compiler: C:/Program Files (x86)/Microsoft Visual Studio/2019/Enterprise/VC/Tools/MSVC/14.16.27023/bin/HostX64/x64/cl.exe 19.16.27045.0
CPPFLAGS:
H5_CPPFLAGS:
AM_CPPFLAGS:
CFLAGS: /DWIN32 /D_WINDOWS
H5_CFLAGS: /W3;/wd4100;/wd4706;/wd4127
AM_CFLAGS:
Shared C Library: YES
Static C Library: YES
Fortran: OFF
Fortran Compiler:
Fortran Flags:
H5 Fortran Flags:
AM Fortran Flags:
Shared Fortran Library: YES
Static Fortran Library: YES
C++: ON
C++ Compiler: C:/Program Files (x86)/Microsoft Visual Studio/2019/Enterprise/VC/Tools/MSVC/14.16.27023/bin/HostX64/x64/cl.exe 19.16.27045.0
C++ Flags:
H5 C++ Flags: /W3;/wd4100;/wd4706;/wd4127
AM C++ Flags:
Shared C++ Library: YES
Static C++ Library: YES
JAVA: OFF
JAVA Compiler:
Features:
Parallel HDF5: OFF
Parallel Filtered Dataset Writes:
Large Parallel I/O:
High-level library: ON
Build HDF5 Tests: ON
Build HDF5 Tools: ON
Threadsafety: ON (recursive RW locks: )
Default API mapping: v112
With deprecated public symbols: ON
I/O filters (external): DEFLATE
MPE:
Direct VFD:
Mirror VFD:
(Read-Only) S3 VFD: 1
(Read-Only) HDFS VFD:
dmalloc:
Packages w/ extra debug output:
API Tracing: OFF
Using memory checker: OFF
Memory allocation sanity checks: OFF
Function Stack Tracing: OFF
Use file locking: best-effort
Strict File Format Checks: OFF
Optimization Instrumentation:
Bye...`
Discovered on Windows 10 and not reproducable on Ubuntu.
The text was updated successfully, but these errors were encountered:
When importing SOFA and h5py Python throws:
` UserWarning: h5py is running against HDF5 1.12.1 when it was built against 1.12.2, this may cause problems
_warn(("h5py is running against HDF5 {0} when it was built against {1}, "
Warning! HDF5 library version mismatched error
The HDF5 header files used to compile this application do not match
the version used by the HDF5 library to which this application is linked.
Data corruption or segmentation faults may occur if the application continues.
This can happen when an application was compiled by one version of HDF5 but
linked with a different version of static or shared HDF5 library.
You should recompile the application or check your shared library related
settings such as 'LD_LIBRARY_PATH'.
You can, at your own risk, disable this warning by setting the environment
variable 'HDF5_DISABLE_VERSION_CHECK' to a value of '1'.
Setting it to 2 or higher will suppress the warning messages totally.
Headers are 1.12.2, library is 1.12.1
SUMMARY OF THE HDF5 CONFIGURATION
=================================
General Information:
Compiling Options:
Linking Options:
Statically Linked Executables: OFF
LDFLAGS: /machine:x64
H5_LDFLAGS:
AM_LDFLAGS:
Extra libraries: D:/bld/hdf5_split_1646412547396/_h_env/Library/lib/libcurl.lib;D:/bld/hdf5_split_1646412547396/_h_env/Library/lib/libssl.lib;D:/bld/hdf5_split_1646412547396/_h_env/Library/lib/libcrypto.lib
Archiver: C:/Program Files (x86)/Microsoft Visual Studio/2019/Enterprise/VC/Tools/MSVC/14.16.27023/bin/HostX64/x64/lib.exe
Ranlib: :
Languages:
Features:
Parallel Filtered Dataset Writes:
Large Parallel I/O:
High-level library: ON
Build HDF5 Tests: ON
Build HDF5 Tools: ON
Threadsafety: ON (recursive RW locks: )
Default API mapping: v112
With deprecated public symbols: ON
I/O filters (external): DEFLATE
MPE:
Direct VFD:
Mirror VFD:
(Read-Only) S3 VFD: 1
(Read-Only) HDFS VFD:
dmalloc:
Packages w/ extra debug output:
API Tracing: OFF
Using memory checker: OFF
Memory allocation sanity checks: OFF
Function Stack Tracing: OFF
Use file locking: best-effort
Strict File Format Checks: OFF
Optimization Instrumentation:
Bye...`
Discovered on Windows 10 and not reproducable on Ubuntu.
The text was updated successfully, but these errors were encountered: