Code

Feature/issue 1062 ode speedup#1066

Code

Merged

wds15 merged 36 commits intodevelopstan-dev/math:developfrom feature/issue-1062-ode-speedupstan-dev/math:feature/issue-1062-ode-speedupCopy head branch name to clipboardMay 10, 2019

+94-32

Commits

Commits on Nov 7, 2018

• tune access to AD stack during ODE integration of the coupled system

  

  Sebastian Weber

  committed
  877d5c3

• make all tests happy

  

  Sebastian Weber

  committed
  72922fe

Commits on Nov 17, 2018

• recover adjoints of outer AD tree

  

  Sebastian Weber

  committed
  3709f55

• more lazy cleanup

  

  Sebastian Weber

  committed
  f4046a7

Commits on Jan 27, 2019

• Merge remote-tracking branch 'origin/develop' into feature/issue-1062-ode-speedup

  wds15

  committed
  223885f

• avoid re-allocation of constant parameter vector on nested AD stack by having a copy of it on the outer stack

  wds15

  committed
  017948c

• avoid a few copies and add explicit move semantics where appropiate in cvodes solvers

  wds15

  committed
  733f9af

Commits on Jan 28, 2019

• move local theta copy to nonstack tape

  wds15

  committed
  2c8856f

Commits on Jan 29, 2019

• add tests for constant stack size when instantiating coupled_ode_system

  weberse2

  committed
  9dbd0f9

• [Jenkins] auto-formatting by clang-format version 5.0.0-3~16.04.1 (tags/RELEASE_500/final)

  stan-buildbot

  committed
  4d22c0c

Commits on Feb 3, 2019

• Merge branch 'feature/issue-1062-ode-speedup' of https://github.com/stan-dev/math into feature/issue-1062-ode-speedup

  wds15

  committed
  965ab13

• rename theta_copy_ to theta_nochain_ and add doc for the special handling

  wds15

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  b8c64e7

Commits on Feb 4, 2019

• address review comments

  wds15

  committed
  718804c

Commits on Feb 21, 2019

• add a comment to explain "manual" adjoint zeroing

  weberse2

  committed
  f1d3c03

• Merge commit 'd7dc42dee65a1f08ef9c2195ba940531e2e797a6' into HEAD

  yashikno

  committed
  2561e04

• [Jenkins] auto-formatting by clang-format version 5.0.0-3~16.04.1 (tags/RELEASE_500/final)

  stan-buildbot

  committed
  29b91dc

• Merge branch 'feature/issue-1062-ode-speedup' of https://github.com/stan-dev/math into feature/issue-1062-ode-speedup

  weberse2

  committed
  7715209

Commits on Mar 2, 2019

• ange design of speedup approach

  wds15

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  b365d53

• optimize reuse of theta adjoint in global AD tree

  wds15

  committed
  f15c6ef

• Merge branch 'feature/issue-1062-ode-speedup' of https://github.com/stan-dev/math into feature/issue-1062-ode-speedup

  wds15

  committed
  6c5beec

Commits on Mar 14, 2019

• Merge remote-tracking branch 'origin/develop' into feature/issue-1062-ode-speedup

  wds15

  committed
  86154f9

• add doc on backup-and-restore approach

  wds15

  committed
  d4957de

Commits on Apr 1, 2019

• Merge branch 'feature/issue-1062-ode-speedup' of https://github.com/stan-dev/math into feature/issue-1062-ode-speedup

  weberse2

  committed
  0922a26

• put in approach which does not modify the outer AD tree; still needs work to straighten the decouple operation

  weberse2

  committed
  2a365db

• Merge commit 'cb204e0bf0735a294c2689fc8bb3a4572a1becee' into HEAD

  yashikno

  committed
  03c7a5e

• [Jenkins] auto-formatting by clang-format version 5.0.0-3~16.04.1 (tags/RELEASE_500/final)

  stan-buildbot

  committed
  1e78847

Commits on Apr 2, 2019

• Merge branch 'feature/issue-1062-ode-speedup' of https://github.com/stan-dev/math into feature/issue-1062-ode-speedup

  weberse2

  committed
  b5053c1

Commits on May 5, 2019

• Merge remote-tracking branch 'origin/develop' into feature/issue-1062-ode-speedup

  wds15

  committed
  83ca05d

• revert to the nochain approach

  wds15

  committed
  e506db8

• doc special nochain speedup side-effects

  wds15

  committed
  c0fb42c

• Merge branch 'feature/issue-1062-ode-speedup' of https://github.com/stan-dev/math into feature/issue-1062-ode-speedup

  wds15

  committed
  f07855b

Commits on May 9, 2019

• Merge branch 'feature/issue-1062-ode-speedup' of https://github.com/stan-dev/math into feature/issue-1062-ode-speedup

  weberse2

  committed
  2390317

• remove left-over outdated doc

  weberse2

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  20883c6

• address reviewer comments on test; make test-purpose for the size clearer

  weberse2

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  f71715f

• Merge commit '57215ead04f95c25cb36b7b8f21776d0090cff55' into HEAD

  yashikno

  committed
  cc72c41

• [Jenkins] auto-formatting by clang-format version 5.0.0-3~16.04.1 (tags/RELEASE_500/final)

  stan-buildbot

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