From 3ded91819a9430a01c93ebdca383b5e94a897753 Mon Sep 17 00:00:00 2001 From: Simonas Jakubonis <20096648+simjak@users.noreply.github.com> Date: Sat, 10 Feb 2024 22:05:28 +0200 Subject: [PATCH] chore: Poetry + precommit (#27) * chore: Poetry + precommit * Remove uneccesary dependencies * Update github workflows * Add poetry version to github workflow * Update Makefile * Small tweaks --------- Co-authored-by: Ismail Pelaseyed --- .github/workflows/lint.yml | 12 +- .pre-commit-config.yaml | 77 + Makefile | 10 +- poetry.lock | 3231 ++++++++++++++++++++++++++++++++++++ pyproject.toml | 58 + requirements.txt | 118 -- service/embedding.py | 7 +- service/vector_database.py | 8 +- 8 files changed, 3388 insertions(+), 133 deletions(-) create mode 100644 .pre-commit-config.yaml create mode 100644 poetry.lock create mode 100644 pyproject.toml delete mode 100644 requirements.txt diff --git a/.github/workflows/lint.yml b/.github/workflows/lint.yml index 44bab06a..269f1344 100644 --- a/.github/workflows/lint.yml +++ b/.github/workflows/lint.yml @@ -5,6 +5,9 @@ on: branches: [main] pull_request: +env: + POETRY_VERSION: "1.4.2" + jobs: build: runs-on: ubuntu-latest @@ -16,14 +19,17 @@ jobs: - "3.11" steps: - uses: actions/checkout@v4 + - name: Install poetry + run: | + pipx install poetry==$POETRY_VERSION - name: Set up Python ${{ matrix.python-version }} uses: actions/setup-python@v5 with: python-version: ${{ matrix.python-version }} + cache: poetry - name: Install dependencies run: | - python -m pip install --upgrade pip - pip install -r requirements.txt + poetry install - name: Analysing the code with our lint run: | - make lint + make lint \ No newline at end of file diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml new file mode 100644 index 00000000..b24594f3 --- /dev/null +++ b/.pre-commit-config.yaml @@ -0,0 +1,77 @@ +default_language_version: + python: python3.9 +repos: + - repo: meta + hooks: + - id: check-hooks-apply + - id: check-useless-excludes + + - repo: https://github.com/psf/black + rev: 23.9.1 + hooks: + - id: black + + - repo: https://github.com/asottile/blacken-docs + rev: 1.16.0 + hooks: + - id: blacken-docs + additional_dependencies: [black==22.10.0] + + - repo: https://github.com/alessandrojcm/commitlint-pre-commit-hook + rev: v9.11.0 + hooks: + - id: commitlint + stages: [commit-msg] + additional_dependencies: ['@commitlint/config-conventional'] + + - repo: https://github.com/codespell-project/codespell + rev: v2.2.4 + hooks: + - id: codespell + name: Run codespell to check for common misspellings in files + language: python + types: [ text ] + args: [ "--write-changes", "--ignore-words-list", "asend" ] + exclude: "poetry.lock" + + - repo: https://github.com/pre-commit/pre-commit-hooks + rev: v4.4.0 + hooks: + - id: check-vcs-permalinks + - id: end-of-file-fixer + - id: trailing-whitespace + args: [ --markdown-linebreak-ext=md ] + - id: debug-statements + - id: no-commit-to-branch + - id: check-merge-conflict + - id: check-toml + - id: check-yaml + args: [ '--unsafe' ] # for mkdocs.yml + - id: detect-private-key + + - repo: https://github.com/commitizen-tools/commitizen + rev: v3.13.0 + hooks: + - id: commitizen + - id: commitizen-branch + stages: + - post-commit + - push + + - repo: https://github.com/astral-sh/ruff-pre-commit + rev: v0.0.290 + hooks: + - id: ruff + types_or: [python, pyi, jupyter] + + # - repo: https://github.com/pre-commit/mirrors-mypy + # rev: v1.8.0 + # hooks: + # - id: mypy + # args: [--ignore-missing-imports] + + - repo: https://github.com/PyCQA/bandit + rev: 1.7.6 + hooks: + - id: bandit + args: ['-lll'] diff --git a/Makefile b/Makefile index 2596be0e..ffdb6dcb 100644 --- a/Makefile +++ b/Makefile @@ -1,11 +1,13 @@ format: - python -m black . - python -m ruff --select I --fix . + poetry run black . + poetry run ruff --select I --fix . + poetry run vulture . --exclude=venv PYTHON_FILES=. lint: PYTHON_FILES=. lint_diff: PYTHON_FILES=$(shell git 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a/requirements.txt +++ /dev/null @@ -1,118 +0,0 @@ -aiohttp==3.9.1 -aiosignal==1.3.1 -annotated-types==0.6.0 -anyio==4.2.0 -astrapy==0.7.0 -attrs==23.2.0 -Authlib==1.3.0 -backoff==2.2.1 -beautifulsoup4==4.12.2 -black==23.12.1 -cassandra-driver==3.29.0 -cassio==0.1.4 -certifi==2023.11.17 -cffi==1.16.0 -charset-normalizer==3.3.2 -click==8.1.7 -cohere==4.42 -coloredlogs==15.0.1 -colorlog==6.8.2 -cryptography==41.0.7 -dataclasses-json==0.6.3 -Deprecated==1.2.14 -dirtyjson==1.0.8 -distro==1.9.0 -dnspython==2.4.2 -docx2txt==0.8 -fastapi==0.109.0 -fastavro==1.9.3 -fastembed==0.1.3 -filelock==3.13.1 -flatbuffers==23.5.26 -frozenlist==1.4.1 -fsspec==2023.12.2 -geomet==0.2.1.post1 -greenlet==3.0.3 -grpcio==1.60.0 -grpcio-tools==1.60.0 -gunicorn==21.2.0 -h11==0.14.0 -h2==4.1.0 -hpack==4.0.0 -httpcore==1.0.2 -httptools==0.6.1 -httpx==0.25.2 -huggingface-hub==0.19.4 -humanfriendly==10.0 -hyperframe==6.0.1 -idna==3.6 -importlib-metadata==6.11.0 -Jinja2==3.1.3 -joblib==1.3.2 -llama-index==0.9.46 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embedding_model = TextEmbedding( + model_name="sentence-transformers/all-MiniLM-L6-v2" ) embeddings: List[np.ndarray] = list(embedding_model.embed(node.text)) embedding = ( diff --git a/service/vector_database.py b/service/vector_database.py index 7258a6c9..5dae685f 100644 --- a/service/vector_database.py +++ b/service/vector_database.py @@ -5,7 +5,7 @@ import weaviate from astrapy.db import AstraDB from decouple import config -from fastembed.embedding import FlagEmbedding as Embedding +from fastembed import TextEmbedding from pinecone import Pinecone, ServerlessSpec from qdrant_client import QdrantClient from qdrant_client.http import models as rest @@ -36,9 +36,9 @@ async def convert_to_rerank_format(): async def delete(self, file_url: str): pass - async def _generate_vectors(sefl, input: str): - embedding_model = Embedding( - model_name="sentence-transformers/all-MiniLM-L6-v2", max_length=512 + async def _generate_vectors(self, input: str): + embedding_model = TextEmbedding( + model_name="sentence-transformers/all-MiniLM-L6-v2" ) embeddings: List[np.ndarray] = list(embedding_model.embed(input)) return embeddings[0].tolist()