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fix: properly format spec comments in the resources
`os-runtime` now writes `yaml` block as raw yaml bytes instead of decoding it into `yaml.Node` and encoding that `yaml.Node` back to YAML. The reason is that `go-yaml` comments decoder can't really handle comment placement properly, so it messes up indents here and there. Signed-off-by: Artem Chernyshev <artem.0xD2@gmail.com> (cherry picked from commit e31790f)
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