diff --git a/scib/preprocessing.py b/scib/preprocessing.py index cbcec346..b80aceb3 100644 --- a/scib/preprocessing.py +++ b/scib/preprocessing.py @@ -686,7 +686,7 @@ def score_cell_cycle(adata, organism="mouse"): f"cell cycle genes not in adata\n organism: {organism}\n varnames: {rand_genes}" ) - sc.tl.score_genes_cell_cycle(adata, s_genes, g2m_genes) + sc.tl.score_genes_cell_cycle(adata, s_genes=s_genes, g2m_genes=g2m_genes) def save_seurat(adata, path, batch, hvgs=None):