g5km.sh

#!/bin/bash

##
# g5km.sh - Created by Timothy Morey on 10/17/2012.
#
# This file provides a ranger batch script that will do a PISM run using 5km 
# Greenland data.  The parameters used in this file are based on the parameters 
# of the first run in the examples/searise-greenland/experiments.sh script that 
# is distributed with PISM 0.5.
#

#$ -V
#$ -cwd
#$ -j y
#$ -o o.$JOB_NAME.$JOB_ID
#$ -q normal
#$ -l h_rt=00:30:00
#$ -M timmorey@gmail.com
#$ -m be

set -x

PISM=$WORK/pism/software/pism-dev/build/pismr
INFILE=$WORK/pism/g5km_0_ftt.nc
OUTDIR=$SCRATCH/$JOB_NAME.$JOB_ID 

SKIP="-skip -skip_max 200"
COUPLER="-atmosphere searise_greenland -surface pdd -pdd_annualize -ocean constant"
OPTS="$SKIP $COUPLER -i $INFILE -y 0"

mkdir $OUTDIR

for i in 1 2 3 
do
	/usr/bin/time -p ibrun $PISM $OPTS \
		-o_format netcdf3 -o $OUTDIR/g5km.nc3.$i.nc \
		-log_summary

	/usr/bin/time -p ibrun $PISM $OPTS \
		-o_format netcdf4_parallel -o $OUTDIR/g5km.nc4.$i.nc \
		-log_summary

	/usr/bin/time -p ibrun $PISM $OPTS \
		-o_format pnetcdf -o $OUTDIR/g5km.pnc.$i.nc \
		-log_summary
done