A Collection of Platform, Tools, and Resources for Antibody Engineering
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Updated
Jun 30, 2023 - Python
A Collection of Platform, Tools, and Resources for Antibody Engineering
Protein structure handling in Python made easy.
An unofficial re-implementation of DiffAb, a diffusion-based generative model for antigen-specific antibody design and optimization.
This repository contains codes for the regeneration of figures 3b and 3g in Tam, C., Kukimoto-Niino, M., Miyata-Yabuki, Y. et al. Targeting Ras-binding domain of ELMO1 by computational nanobody design. Commun Biol 6, 284 (2023).
The official implementation of "Improving Antibody Humanness Prediction using Patent Data".
Characterizing Broadly Neutralizing Antibody Maturation Pathways Using Reinforcement Learning
Gradient guided discrete walk-jump sampling
An antibody-specific language model focusing on NGL prediction
This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)
PD-1 Targeted Antibody Discovery Using AI Protein Diffusion
Improved antibody structure-based design using inverse folding
Code for Opponent Shaping for Antibody Development
The Rosetta Bio-macromolecule modeling package.
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