Demultiplexing pipeline for sequencing data

Nextflow pipeline for Illumina NGS demultiplexing

Workflow for Illumina's bcl2fastq

for split fastq from mix bcl or fastq data by barcode/index

An awesome BCL demultiplexing and FastQ quality-control pipeline

A simple nextflow pipeline for Illumina run metrics (InterOp) and generation of fastq files (bcl2fastq)

Demultiplexing pipeline for sequencing data

a shiny frontend for the nextflow-bcl pipeline

RNA-seq workflow for UALBANY CFG - Demux, QC, Vis, Align, preProcess, DGE Calls

bcl2fastq by Illumina