cell-cell-communication

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Here are 5 public repositories matching this topic...

theislab / ncem

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Learning cell communication from spatial graphs of cells

tensorflow glm cvae encoder-decoder-model gnn scanpy cell-cell-interaction cell-cell-communication squidpy

Updated Jan 15, 2024
Python

earmingol / cell2cell

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User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins

machine-learning bioinformatics rna-seq computational-biology rnaseq single-cell single-cell-rna-seq bulk-rna-seq sc-rna-seq cell-cell-interaction cell-cell-communication

Updated Jun 14, 2024
Python

lhc17 / HoloNet

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HoloNet. Reveal the holograph of functional communication events in spatial transcriptomics. Help understand how microenvironments shaping cellular phenotypes

python bioinformatics spatial-transcriptomics cell-cell-communication

Updated Aug 30, 2024
Python

saezlab / liana-py

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LIANA+: an all-in-one framework for cell-cell communication

python spatial single-cell single-cell-rna-seq ligand-receptor cell-cell-communication spatialomics

Updated Sep 21, 2024
Python

ZJUFanLab / SpaTrio

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gene-regulation spatial-transcriptomics cell-cell-communication spatial-omics single-cell-multi-omics

Updated Oct 2, 2024
Python

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cell-cell-communication

Here are 5 public repositories matching this topic...

theislab / ncem

earmingol / cell2cell

lhc17 / HoloNet

saezlab / liana-py

ZJUFanLab / SpaTrio

Improve this page

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