Cytofin-an R package for CyTOF data integration

🌻 View single-cell RNA-seq and mass cytometry data in synovial tissues from patients with RA or OA.

Analysis and visualisation single-cell proteomic data (CyTOF)

Fast auto-cleanup of CyTOF data

Source code for the At-Risk RA work

Opens two or more FCS files and creates new files that contain only the Channels common to all.

Lite version of the tool to analyze and visualize CyTOF data (still under development)

Very fast method to read number of events from some / all FCS files in a directory

Batch effect correction and automated gating of CyTOF data

Plots the MDS (Multi-dimensional scaling) of 3 or more FCS files.

R Script to plot the average event rate in flow or mass cytometry (FCS) files

Accurate and Efficient Simulation of CyTOF data