Bioinformatics - Differential Expression Analysis
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Updated
Nov 2, 2022 - R
Bioinformatics - Differential Expression Analysis
Method of Combined P-value to identify Differential Expressed Gene in dataset
Differential gene expression analysis of Nannochloropsis oceanica growth with or without beneficial/harmful bacteria.
Differential gene expression and gene enrichment analyses of B-cell line with ectopic expression of HIV-1 Tat protein
MICTI- Marker gene Identification for Cell Type Identity
Differential gene expression analysis exercise for the course Analytical Methods in Cancer Genomics 2023. The goal is to perform analysis of RNA-Seq data.
EasyDEA: An Automated Tool for Differential Expression Analysis
Differential gene expression and gene enrichment analyses of B-cell line with ectopic expression of HIV-1 Tat protein
Difference test with Gene expression by permutation method( by T-test and median test)
R Shiny app for differential-expression analysis using T-test. The app is automatically deployed via GH Actions to shinyapp.io available as https://fuzzylife.shinyapps.io/diffExpr/
In this lab we will perform a differential expression analysis starting from scratch. Doxorubicin is a commonly prescribed cancer drug, but one of its side effects is cardiotoxicity. This drug damages heart cells by binding to the protein topoisomerase-II beta, or Top2b.
This is a compilation of my scripts for denovo-RNA-Seq assembly, annotation, and get count metrics for Differential gene expression analysis in Nesi hpc.
Here, we describe and provide an RNA-Seq analysis of a RIP assay to understand the mechanism of AML del(9q) progression. (Ali T. Abdallah)
SPOT - Swift Profiling Of Transcriptomes - a shiny app for gene ranking according to user-defined expression profiles
Performing RNA-Seq data analysis and quality control using DESeq2 in R.
Multi-omics differential expression and integration using PPI networks
RNA-Seq analysis pipeline for investigating transcriptional changes during mammalian cardiac regeneration.
Analysis of data from GEO
GWAS of Postmortem Brain Samples Sheds Light on the Development of Schizophrenia and Bipolar Disorder
A library for differential expression and gene set enrichment analysis based on hydra and pydantic.
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