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hgvs

Here are 13 public repositories matching this topic...

mutalyzer / client

Mutalyzer API client and command line interface.

api cli bioinformatics vcf hgvs mutalyzer

Updated Sep 19, 2018
Python

liuyanbioinfo / transvar

TransVar - multiway annotator for precision medicine

annotation oncology hgvs

Updated Jul 1, 2019
Python

ccwang002 / pyhgvs-lite

A liteweight Python parser for HGVS names

parser hgvs lark-parser

Updated Apr 10, 2020
Python

NGeneBio-Genomics-Platform / hgvs

HGVS variant name parsing and generation

python variant hgvs

Updated Apr 29, 2020
Python

NGeneBio-Genomics-Platform / vv_hgvs

Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`

validation variants hgvs

Updated Oct 23, 2020
Python

NGeneBio-Genomics-Platform / variantFormatter

validation variant hgvs

Updated Jan 13, 2021
Python

NGeneBio-Genomics-Platform / rest_variantValidator

REST Interface for VariantValidator. Includes docker container

api rest validator vcf variant hgvs

Updated Jan 14, 2021
Python

NGeneBio-Genomics-Platform / variantValidator

Public repository for VariantValidator project

validation nomenclature vcf hgvs

Updated Jan 28, 2021
Python

mutalyzer / crossmapper

HGVS numbering conversions

map convert position coding genomic coordinate hgvs mutalyzer noncoding

Updated Nov 21, 2021
Python

mutalyzer / algebra

A Boolean Algebra for Genetic Variants

python bioinformatics algebra genomics graph string genetics extractor edit-distance dna variants alignment compare sequence lcs relations hgvs

Updated Nov 5, 2024
Python

mutalyzer / hgvs-parser

HGVS variant description parser

syntax parser bioinformatics grammar description variant hgvs mutalyzer

Updated Sep 17, 2024
Python

mutalyzer / mutalyzer

Tool suite for HGVS variant descriptions

map bioinformatics convert description variant normalize hgvs mutalyzer

Updated Oct 21, 2024
Python

pstawinski / pygenebe

PyGeneBe: A Python client seamlessly integrating with the GeneBe platform, offering efficient annotation of genetic variants through its API, while supporting pandas, VCF file formats, and HGVS parsing

python bioinformatics genetics clinvar variant-annotations hgvs gnomad vep-annotation acmg-guidelines

Updated Nov 2, 2024
Python

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