Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)

Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

Fast Whole-Genome Similarity (ANI) Estimation

A genome visualization python package for comparative genomics

Build a partitioned pangenome graph from microbial genomes

A tool for drawing ANI clustermap between all-vs-all microbial genomes

From genomes to phenotypes: Traitar, the microbial trait analyzer

A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category

🦠📇 Microbial genomes-to-report pipeline

Estimate metagenomic coverage and sequence diversity

Collection of scripts for bacterial genomics

A pipeline for high-quality bacterial genome construction using ONT sequencing

Bioinformatics pipeline for recovery and analysis of metagenome-assembled genomes

Microbial Genome Circular plotting tool for comparative genomics using Circos

MiGA: Microbial Genomes Atlas

A Java Desktop application with a graphical user interface for the discovery of colinear syntenic blocks across thousands microbial genomes

Get microbial sequence data easier and faster

A comprehensive and intuitive encapsulated OO class system for analyzing bacterial pangenomes in R.

A Python package for gene-centric taxonomic and functional classification using phylogenetic placement

Easy-to-use web application for visualization and comparison of genomes in Genbank file