nextclade

Here are 4 public repositories matching this topic...

snakemake phylogenetics nextstrain virus-evolution nextclade

This is the pipeline that handles SARS-CoV-2 samples from the health sector in Region Midtjylland (Illumina PE)

KDHE Influenza A pipeline, built to take MinIon fastq files and produce clade analysis

bioinformatics-pipeline irma minion influenza kansas nextclade

Pipeline to generate consensus.fasta files and identify pangolin lineage and nextstrain clade of Sars-CoV-2 genomes from ONT sequencing

pangolin artic covid-19 sars-cov-2 nextclade

Add a description, image, and links to the nextclade topic page so that developers can more easily learn about it.

To associate your repository with the nextclade topic, visit your repo's landing page and select "manage topics."