Visualize the inner workings of RNA bioinformatics algorithms for structure prediction, interaction prediction and sequence alignment.
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Feb 28, 2024 - JavaScript
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nussinov
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Python implementation of Nussinov RNA folding algorithm and recursive backtrack.
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Oct 29, 2020 - Python
Tools For Computational Biology
nussinov population-genomics population-genetics rna-structure-prediction distance-matrix-computation rna-folding vcf-files distance-matrix nussinov-algorithm vcf-file-distance-matrix population-determination
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Apr 13, 2020 - C++
Project of Algoritmi e Strutture Dati. To realize in Java an implementation of Nussinov's algorithm that, given a sequence of nucleotides, finds a pseudonode-free RNA secondary structure with a maximum number of weak bonds. The problem is to be solved using the dynamic programming technique.
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Jan 4, 2023 - Java
RNA secondary structure predictor based on the Nussinov algorithm that generates all optimal structures utilizing the Wuchty algorithm with visualization of the best predicted secondary structure.
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Dec 14, 2024 - Jupyter Notebook
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