HosnaJabbari / Iterative-HFold Star 3 Code Issues Pull requests RNA Pseudoknotted Secondary Structure Prediction Using Relaxed Hierarchical Folding rna-structure rna rna-structure-prediction pseudoknot-structures rna-folding hfold hfold-iterative iterative-hfold Updated Jul 18, 2024 C++
HosnaJabbari / CCJ Star 2 Code Issues Pull requests MFE method for predicting the psuedoknotted secondary structures of RNA sequences. rna-structure rna rna-structure-prediction pseudoknot-structures rna-folding ccj Updated Feb 22, 2018 C++
HosnaJabbari / DinoKnot Star 2 Code Issues Pull requests RNA/DNA/PMO Pseudoknotted Secondary Structure Interaction Prediction Using Relaxed Hierarchical Folding rna-structure rna rna-structure-prediction pseudoknot-structures rna-folding hfold hfold-interacting interacting-hfold Updated Aug 14, 2024 C++