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single-cell-transcriptomics

Here are 4 public repositories matching this topic...

ChanghanGitHub / exFINDER

Identifying external communication signals using single-cell transcriptomics data

cell-cell-communication single-cell-transcriptomics external-signals

Updated Jun 10, 2024
HTML

earmingol / scCellFie

scCellFie, inspired by the MATLAB-based CellFie tool, offers advanced analysis of metabolic functions on Python using single-cell and spatial transcriptomics. Efficient and user-friendly, it integrates with Scanpy to extend CellFie's capabilities, enabling in-depth single-cell and spatial metabolic task analysis.

systems-biology metabolism single-cell metabolic-pathways spatial-transcriptomics single-cell-transcriptomics metabolic-modeling

Updated Oct 21, 2024
Python

royfrancis / seqhub

Guide and links related to bulk and single-cell RNA-Seq experiments.

rna-seq single-cell-rna-seq single-cell-omics rnaseq-analysis single-cell-transcriptomics

Updated Nov 12, 2024
TeX

okadalabipr / ASURAT

ASURAT: functional annotation-driven unsupervised clustering of single-cell transcriptomes

single-cell-transcriptomics

Updated Jan 19, 2023
R

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