From 94c9c71e11bda19b88fd06ea288d3dbb68896cba Mon Sep 17 00:00:00 2001 From: Daniel Shields Date: Mon, 4 Jan 2021 18:16:20 -0600 Subject: [PATCH 1/4] added several plan building speed improvements --- src/uberjob/_plan.py | 79 +++++++++++++------------ src/uberjob/_run.py | 18 +++--- src/uberjob/_scope.py | 36 ----------- src/uberjob/_transformations/caching.py | 21 ++++--- src/uberjob/_transformations/pruning.py | 2 +- src/uberjob/_util/__init__.py | 2 + src/uberjob/_util/validation.py | 4 +- 7 files changed, 69 insertions(+), 93 deletions(-) delete mode 100644 src/uberjob/_scope.py diff --git a/src/uberjob/_plan.py b/src/uberjob/_plan.py index 2c0d6f8..761d2c6 100644 --- a/src/uberjob/_plan.py +++ b/src/uberjob/_plan.py @@ -19,7 +19,6 @@ from typing import Callable, ContextManager, Tuple from uberjob import _builtins -from uberjob._scope import set_full_scope from uberjob._util import fully_qualified_name, validation from uberjob._util.traceback import get_stack_frame from uberjob.graph import ( @@ -52,19 +51,23 @@ class Plan: def __init__(self): self.graph = Graph() """The underlying :class:`networkx.MultiDiGraph`.""" - self._scope = () self._scope_lock = RLock() - def _add_node(self, node: Node, *, implicit_scope=None): - self.graph.add_node(node) - set_full_scope(self.graph, node, self._scope, implicit_scope) - - def _add_edge(self, u: Node, v: Node, e: Dependency): - for node in (u, v): - if not self.graph.has_node(node): - raise Exception(f"The plan graph does not contain the node {node!r}.") - self.graph.add_edge(u, v, e) + def _call(self, stack_frame, fn: Callable, *args, **kwargs) -> Call: + call = Call(fn, stack_frame=stack_frame) + self.graph.add_node( + call, scope=self._scope, implicit_scope=(fully_qualified_name(fn),) + ) + for index, arg in enumerate(args): + self.graph.add_edge( + self._gather(stack_frame, arg), call, PositionalArg(index) + ) + for index, (name, arg) in enumerate(kwargs.items()): + self.graph.add_edge( + self._gather(stack_frame, arg), call, KeywordArg(name, index) + ) + return call def call(self, fn: Callable, *args, **kwargs) -> Call: """ @@ -80,14 +83,7 @@ def call(self, fn: Callable, *args, **kwargs) -> Call: """ validation.assert_is_callable(fn, "fn") validation.assert_can_bind(fn, *args, **kwargs) - call = Call(fn, stack_frame=get_stack_frame()) - - self._add_node(call, implicit_scope=(fully_qualified_name(fn),)) - for index, arg in enumerate(args): - self._add_edge(self.gather(arg), call, PositionalArg(index)) - for index, (name, arg) in enumerate(kwargs.items()): - self._add_edge(self.gather(arg), call, KeywordArg(name, index)) - return call + return self._call(get_stack_frame(), fn, *args, **kwargs) def lit(self, value) -> Literal: """ @@ -96,10 +92,10 @@ def lit(self, value) -> Literal: :param value: The literal value. :return: The symbolic literal value. """ - if isinstance(value, Node): + if _is_node(value): raise TypeError(f"The value is already a {Node.__name__}.") literal = Literal(value) - self._add_node(literal) + self.graph.add_node(literal, scope=self._scope) return literal def add_dependency(self, source: Node, target: Node) -> None: @@ -112,7 +108,24 @@ def add_dependency(self, source: Node, target: Node) -> None: """ validation.assert_is_instance(source, "source", Node) validation.assert_is_instance(target, "target", Node) - self._add_edge(source, target, Dependency()) + for node in (source, target): + if not self.graph.has_node(node): + raise Exception(f"The plan graph does not contain the node {node!r}.") + self.graph.add_edge(source, target, Dependency()) + + def _gather(self, stack_frame, value) -> Node: + def recurse(root): + root_type = type(root) + gather_fn = GATHER_LOOKUP.get(root_type) + if gather_fn is not None: + items = root.items() if root_type is dict else root + children = [recurse(item) for item in items] + if any(_is_node(child) for child in children): + return self._call(stack_frame, gather_fn, *children) + return root + + value = recurse(value) + return value if _is_node(value) else self.lit(value) def gather(self, value) -> Node: """ @@ -127,19 +140,7 @@ def gather(self, value) -> Node: :param value: A structured value that may contain instances of :class:`~uberjob.graph.Node`. :return: A single :class:`~uberjob.graph.Node` representing the gathered input value. """ - - def recurse(root): - root_type = type(root) - gather_fn = GATHER_LOOKUP.get(root_type) - if gather_fn: - items = root.items() if root_type is dict else root - children = [recurse(item) for item in items] - if any(_is_node(child) for child in children): - return self.call(gather_fn, *children) - return root - - value = recurse(value) - return value if _is_node(value) else self.lit(value) + return self._gather(get_stack_frame(), value) def unpack(self, iterable, length: int) -> Tuple[Node, ...]: """ @@ -151,8 +152,12 @@ def unpack(self, iterable, length: int) -> Tuple[Node, ...]: """ if not isinstance(length, int) or length < 0: raise ValueError("length must be a non-negative integer.") - t = self.call(_builtins.unpack, iterable, length) - return tuple(self.call(operator.getitem, t, index) for index in range(length)) + stack_frame = get_stack_frame() + t = self._call(stack_frame, _builtins.unpack, iterable, length) + return tuple( + self._call(stack_frame, operator.getitem, t, index) + for index in range(length) + ) @contextmanager def scope(self, *args) -> ContextManager[None]: diff --git a/src/uberjob/_run.py b/src/uberjob/_run.py index 5473901..3e652dd 100644 --- a/src/uberjob/_run.py +++ b/src/uberjob/_run.py @@ -22,14 +22,13 @@ from uberjob._execution.run_physical import run_physical from uberjob._plan import Plan from uberjob._registry import Registry -from uberjob._scope import get_full_scope from uberjob._transformations import get_mutable_plan from uberjob._transformations.caching import plan_with_value_stores from uberjob._transformations.pruning import prune_plan from uberjob._util import fully_qualified_name from uberjob._util.retry import create_retry from uberjob._util.validation import assert_is_callable, assert_is_instance -from uberjob.graph import Call, Node +from uberjob.graph import Call, Graph, Node from uberjob.progress import ( Progress, composite_progress, @@ -38,9 +37,14 @@ ) +def _get_full_scope(graph: Graph, node: Node): + node_data = graph.nodes[node] + return node_data["scope"] + node_data.get("implicit_scope", ()) + + def _get_scope_call_counts(plan: Plan): return collections.Counter( - get_full_scope(plan.graph, node) + _get_full_scope(plan.graph, node) for node in plan.graph.nodes() if type(node) is Call ) @@ -60,7 +64,7 @@ def _prepare_plan_with_registry_and_progress( graph = plan.graph def get_stale_scope(node): - scope = get_full_scope(graph, node) + scope = _get_full_scope(graph, node) value_store = registry.get(node) if not value_store: return scope @@ -110,19 +114,19 @@ def _run_physical_with_progress( def on_started_run(node): progress_observer.increment_running( - section="run", scope=get_full_scope(graph, node) + section="run", scope=_get_full_scope(graph, node) ) def on_completed_run(node): progress_observer.increment_completed( - section="run", scope=get_full_scope(graph, node) + section="run", scope=_get_full_scope(graph, node) ) def on_failed_run(node, exception): call_error = CallError(node) call_error.__cause__ = exception progress_observer.increment_failed( - section="run", scope=get_full_scope(graph, node), exception=call_error + section="run", scope=_get_full_scope(graph, node), exception=call_error ) return run_physical( diff --git a/src/uberjob/_scope.py b/src/uberjob/_scope.py deleted file mode 100644 index ac6464d..0000000 --- a/src/uberjob/_scope.py +++ /dev/null @@ -1,36 +0,0 @@ -# -# Copyright 2020 Two Sigma Open Source, LLC -# -# Licensed under the Apache License, Version 2.0 (the "License"); -# you may not use this file except in compliance with the License. -# You may obtain a copy of the License at -# -# http://www.apache.org/licenses/LICENSE-2.0 -# -# Unless required by applicable law or agreed to in writing, software -# distributed under the License is distributed on an "AS IS" BASIS, -# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -# See the License for the specific language governing permissions and -# limitations under the License. -# -from uberjob.graph import Graph, Node, get_scope - - -def get_implicit_scope(graph: Graph, node: Node): - return graph.nodes[node].get("implicit_scope", ()) - - -def get_full_scope(graph: Graph, node: Node): - return get_scope(graph, node) + get_implicit_scope(graph, node) - - -def set_implicit_scope(graph: Graph, node: Node, implicit_scope): - if implicit_scope: - graph.nodes[node]["implicit_scope"] = tuple(implicit_scope) - elif "implicit_scope" in graph.nodes[node]: - del graph.nodes[node]["implicit_scope"] - - -def set_full_scope(graph: Graph, node: Node, scope, implicit_scope): - graph.nodes[node]["scope"] = tuple(scope) - set_implicit_scope(graph, node, implicit_scope) diff --git a/src/uberjob/_transformations/caching.py b/src/uberjob/_transformations/caching.py index b33301c..8846ba9 100644 --- a/src/uberjob/_transformations/caching.py +++ b/src/uberjob/_transformations/caching.py @@ -19,7 +19,6 @@ from uberjob._execution.run_function_on_graph import run_function_on_graph from uberjob._plan import Plan from uberjob._registry import Registry, RegistryValue -from uberjob._scope import get_implicit_scope, set_implicit_scope from uberjob._transformations import get_mutable_plan from uberjob._transformations.pruning import prune_plan, prune_source_literals from uberjob._util import Slot, safe_max @@ -63,7 +62,7 @@ def process_no_stale_ancestor(node): for predecessor in plan.graph.predecessors(node) ) value_store = registry.get(node) - if not value_store: + if value_store is None: modified_time_lookup[node].value = max_ancestor_modified_time return modified_time = _to_naive_local_timezone(retry(value_store.get_modified_time)()) @@ -107,13 +106,13 @@ def process_with_callbacks(node): def _add_value_store( plan: Plan, node: Node, registry_value: RegistryValue, *, is_stale: bool ) -> Tuple[Optional[Node], Node]: - def nested_call(*args, **kwargs): - call = plan.call(*args, **kwargs) - call.stack_frame = registry_value.stack_frame - implicit_scope = get_implicit_scope(plan.graph, node) + get_implicit_scope( - plan.graph, call + def nested_call(*args): + call = plan._call(registry_value.stack_frame, *args) + call_data = plan.graph.nodes[call] + call_data["implicit_scope"] = ( + plan.graph.nodes[node].get("implicit_scope", ()) + + call_data["implicit_scope"] ) - set_implicit_scope(plan.graph, call, implicit_scope) return call out_edges = list(plan.graph.out_edges(node, keys=True)) @@ -127,12 +126,12 @@ def nested_call(*args, **kwargs): if registry_value.is_source: write_node = plan.lit(Barrier) for predecessor in plan.graph.predecessors(node): - plan.add_dependency(predecessor, write_node) + plan.graph.add_edge(predecessor, write_node, Dependency()) else: write_node = nested_call( value_store.__class__.write, value_store_lit, node ) - plan.add_dependency(write_node, read_node) + plan.graph.add_edge(write_node, read_node, Dependency()) for _, successor, dependency in out_edges: plan.graph.remove_edge(node, successor, dependency) @@ -141,7 +140,7 @@ def nested_call(*args, **kwargs): plan.graph.add_edge(read_node, successor, dependency) elif is_stale: assert dependency_type is Dependency - plan.add_dependency(write_node, successor) + plan.graph.add_edge(write_node, successor, dependency) return write_node, read_node diff --git a/src/uberjob/_transformations/pruning.py b/src/uberjob/_transformations/pruning.py index e148fba..1cf8595 100644 --- a/src/uberjob/_transformations/pruning.py +++ b/src/uberjob/_transformations/pruning.py @@ -67,7 +67,7 @@ def _prune_literal_if_trivial(plan: Plan, literal: Literal) -> None: return for predecessor, successor in itertools.product(predecessors, successors): - plan.add_dependency(predecessor, successor) + plan.graph.add_edge(predecessor, successor, Dependency()) plan.graph.remove_node(literal) diff --git a/src/uberjob/_util/__init__.py b/src/uberjob/_util/__init__.py index de94974..c432564 100644 --- a/src/uberjob/_util/__init__.py +++ b/src/uberjob/_util/__init__.py @@ -13,6 +13,7 @@ # See the License for the specific language governing permissions and # limitations under the License. # +from functools import lru_cache from reprlib import Repr @@ -86,6 +87,7 @@ def repr_helper(instance, *args, defaults=None, **kwargs): ) +@lru_cache(4096) def fully_qualified_name(x): qualname = getattr(x, "__qualname__", None) if not qualname: diff --git a/src/uberjob/_util/validation.py b/src/uberjob/_util/validation.py index 9b5ce66..1848b11 100644 --- a/src/uberjob/_util/validation.py +++ b/src/uberjob/_util/validation.py @@ -15,6 +15,7 @@ # import inspect import typing +from functools import lru_cache from uberjob._util import fully_qualified_name @@ -55,6 +56,7 @@ def assert_is_instance( ) +@lru_cache(4096) def try_get_signature(fn: typing.Callable): try: return inspect.signature(fn) @@ -64,7 +66,7 @@ def try_get_signature(fn: typing.Callable): def assert_can_bind(fn: typing.Callable, *args, **kwargs): sig = try_get_signature(fn) - if not sig: + if sig is None: return try: sig.bind(*args, **kwargs) From f45c8e106bb8d407246b7ca60aacf31749cf09f9 Mon Sep 17 00:00:00 2001 From: Daniel Shields Date: Mon, 4 Jan 2021 18:19:21 -0600 Subject: [PATCH 2/4] updated noxfile and poetry lock file --- noxfile.py | 1 + poetry.lock | 755 +++++++++++++++++++++++++++------------------------- 2 files changed, 387 insertions(+), 369 deletions(-) diff --git a/noxfile.py b/noxfile.py index dc07b6b..96de89d 100644 --- a/noxfile.py +++ b/noxfile.py @@ -30,6 +30,7 @@ def install_with_constraints(session, *args, **kwargs): "poetry", "export", "--dev", + "--without-hashes", "--format=requirements.txt", f"--output={requirements}", external=True, diff --git a/poetry.lock b/poetry.lock index 35a93bd..ff27e0b 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,64 +1,64 @@ [[package]] -category = "dev" -description = "A configurable sidebar-enabled Sphinx theme" name = "alabaster" +version = "0.7.12" +description = "A configurable sidebar-enabled Sphinx theme" +category = "dev" optional = false python-versions = "*" -version = "0.7.12" [[package]] -category = "dev" -description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." name = "appdirs" +version = "1.4.4" +description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." +category = "dev" optional = false python-versions = "*" -version = "1.4.4" [[package]] -category = "dev" -description = "Atomic file writes." -marker = "sys_platform == \"win32\"" name = "atomicwrites" +version = "1.4.0" +description = "Atomic file writes." +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "1.4.0" [[package]] -category = "dev" -description = "Classes Without Boilerplate" name = "attrs" +version = "20.3.0" +description = "Classes Without Boilerplate" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "20.2.0" [package.extras] -dev = ["coverage (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface", "sphinx", "sphinx-rtd-theme", "pre-commit"] -docs = ["sphinx", "sphinx-rtd-theme", "zope.interface"] -tests = ["coverage (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface"] -tests_no_zope = ["coverage (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six"] +dev = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface", "furo", "sphinx", "pre-commit"] +docs = ["furo", "sphinx", "zope.interface"] +tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "zope.interface"] +tests_no_zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six"] [[package]] -category = "dev" -description = "Internationalization utilities" name = "babel" +version = "2.9.0" +description = "Internationalization utilities" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "2.8.0" [package.dependencies] pytz = ">=2015.7" [[package]] -category = "dev" -description = "The uncompromising code formatter." name = "black" +version = "20.8b1" +description = "The uncompromising code formatter." +category = "dev" optional = false python-versions = ">=3.6" -version = "20.8b1" [package.dependencies] appdirs = "*" click = ">=7.1.2" +dataclasses = {version = ">=0.6", markers = "python_version < \"3.7\""} mypy-extensions = ">=0.4.3" pathspec = ">=0.6,<1" regex = ">=2020.1.8" @@ -66,193 +66,185 @@ toml = ">=0.10.1" typed-ast = ">=1.4.0" typing-extensions = ">=3.7.4" -[package.dependencies.dataclasses] -python = "<3.7" -version = ">=0.6" - [package.extras] colorama = ["colorama (>=0.4.3)"] d = ["aiohttp (>=3.3.2)", "aiohttp-cors"] [[package]] -category = "dev" -description = "Python package for providing Mozilla's CA Bundle." name = "certifi" +version = "2020.12.5" +description = "Python package for providing Mozilla's CA Bundle." +category = "dev" optional = false python-versions = "*" -version = "2020.6.20" [[package]] -category = "dev" -description = "Universal encoding detector for Python 2 and 3" name = "chardet" +version = "4.0.0" +description = "Universal encoding detector for Python 2 and 3" +category = "dev" optional = false -python-versions = "*" -version = "3.0.4" +python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" [[package]] -category = "dev" -description = "Composable command line interface toolkit" name = "click" +version = "7.1.2" +description = "Composable command line interface toolkit" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "7.1.2" [[package]] -category = "dev" -description = "Hosted coverage reports for GitHub, Bitbucket and Gitlab" name = "codecov" +version = "2.1.11" +description = "Hosted coverage reports for GitHub, Bitbucket and Gitlab" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "2.1.9" [package.dependencies] coverage = "*" requests = ">=2.7.9" [[package]] -category = "dev" -description = "Cross-platform colored terminal text." -marker = "sys_platform == \"win32\"" name = "colorama" +version = "0.4.4" +description = "Cross-platform colored terminal text." +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "0.4.3" [[package]] -category = "dev" -description = "Code coverage measurement for Python" name = "coverage" +version = "5.3.1" +description = "Code coverage measurement for Python" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, <4" -version = "5.3" [package.dependencies] -[package.dependencies.toml] -optional = true -version = "*" +toml = {version = "*", optional = true, markers = "extra == \"toml\""} [package.extras] toml = ["toml"] [[package]] -category = "dev" -description = "A backport of the dataclasses module for Python 3.6" -marker = "python_version < \"3.7\"" name = "dataclasses" +version = "0.8" +description = "A backport of the dataclasses module for Python 3.6" +category = "dev" optional = false -python-versions = "*" -version = "0.6" +python-versions = ">=3.6, <3.7" [[package]] -category = "main" -description = "Decorators for Humans" name = "decorator" +version = "4.4.2" +description = "Decorators for Humans" +category = "main" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*" -version = "4.4.2" [[package]] -category = "dev" -description = "Docutils -- Python Documentation Utilities" name = "docutils" +version = "0.16" +description = "Docutils -- Python Documentation Utilities" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "0.16" [[package]] -category = "dev" -description = "the modular source code checker: pep8 pyflakes and co" name = "flake8" +version = "3.8.4" +description = "the modular source code checker: pep8 pyflakes and co" +category = "dev" optional = false python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,>=2.7" -version = "3.8.3" [package.dependencies] +importlib-metadata = {version = "*", markers = "python_version < \"3.8\""} mccabe = ">=0.6.0,<0.7.0" pycodestyle = ">=2.6.0a1,<2.7.0" pyflakes = ">=2.2.0,<2.3.0" -[package.dependencies.importlib-metadata] -python = "<3.8" -version = "*" - [[package]] -category = "dev" -description = "flake8 plugin to call black as a code style validator" name = "flake8-black" +version = "0.2.1" +description = "flake8 plugin to call black as a code style validator" +category = "dev" optional = false python-versions = "*" -version = "0.2.1" [package.dependencies] black = "*" flake8 = ">=3.0.0" [[package]] -category = "dev" -description = "A plugin for flake8 finding likely bugs and design problems in your program. Contains warnings that don't belong in pyflakes and pycodestyle." name = "flake8-bugbear" +version = "20.11.1" +description = "A plugin for flake8 finding likely bugs and design problems in your program. Contains warnings that don't belong in pyflakes and pycodestyle." +category = "dev" optional = false python-versions = ">=3.6" -version = "20.1.4" [package.dependencies] attrs = ">=19.2.0" flake8 = ">=3.0.0" +[package.extras] +dev = ["coverage", "black", "hypothesis", "hypothesmith"] + [[package]] -category = "dev" -description = "Internationalized Domain Names in Applications (IDNA)" name = "idna" +version = "2.10" +description = "Internationalized Domain Names in Applications (IDNA)" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "2.10" [[package]] -category = "dev" -description = "Getting image size from png/jpeg/jpeg2000/gif file" name = "imagesize" +version = "1.2.0" +description = "Getting image size from png/jpeg/jpeg2000/gif file" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "1.2.0" [[package]] -category = "dev" -description = "Read metadata from Python packages" -marker = "python_version < \"3.8\"" name = "importlib-metadata" +version = "3.3.0" +description = "Read metadata from Python packages" +category = "dev" optional = false -python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7" -version = "2.0.0" +python-versions = ">=3.6" [package.dependencies] +typing-extensions = {version = ">=3.6.4", markers = "python_version < \"3.8\""} zipp = ">=0.5" [package.extras] -docs = ["sphinx", "rst.linker"] -testing = ["packaging", "pep517", "importlib-resources (>=1.3)"] +docs = ["sphinx", "jaraco.packaging (>=3.2)", "rst.linker (>=1.9)"] +testing = ["pytest (>=3.5,!=3.7.3)", "pytest-checkdocs (>=1.2.3)", "pytest-flake8", "pytest-cov", "jaraco.test (>=3.2.0)", "packaging", "pep517", "pyfakefs", "flufl.flake8", "pytest-black (>=0.3.7)", "pytest-mypy", "importlib-resources (>=1.3)"] [[package]] -category = "dev" -description = "A Python utility / library to sort Python imports." name = "isort" +version = "5.7.0" +description = "A Python utility / library to sort Python imports." +category = "dev" optional = false python-versions = ">=3.6,<4.0" -version = "5.5.3" [package.extras] -colors = ["colorama (>=0.4.3,<0.5.0)"] pipfile_deprecated_finder = ["pipreqs", "requirementslib"] requirements_deprecated_finder = ["pipreqs", "pip-api"] +colors = ["colorama (>=0.4.3,<0.5.0)"] [[package]] -category = "dev" -description = "A very fast and expressive template engine." name = "jinja2" +version = "2.11.2" +description = "A very fast and expressive template engine." +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "2.11.2" [package.dependencies] MarkupSafe = ">=0.23" @@ -261,44 +253,44 @@ MarkupSafe = ">=0.23" i18n = ["Babel (>=0.8)"] [[package]] -category = "dev" -description = "Safely add untrusted strings to HTML/XML markup." name = "markupsafe" +version = "1.1.1" +description = "Safely add untrusted strings to HTML/XML markup." +category = "dev" optional = false python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*" -version = "1.1.1" [[package]] -category = "dev" -description = "McCabe checker, plugin for flake8" name = "mccabe" +version = "0.6.1" +description = "McCabe checker, plugin for flake8" +category = "dev" optional = false python-versions = "*" -version = "0.6.1" [[package]] -category = "dev" -description = "More routines for operating on iterables, beyond itertools" name = "more-itertools" +version = "8.6.0" +description = "More routines for operating on iterables, beyond itertools" +category = "dev" optional = false python-versions = ">=3.5" -version = "8.5.0" [[package]] -category = "dev" -description = "Experimental type system extensions for programs checked with the mypy typechecker." name = "mypy-extensions" +version = "0.4.3" +description = "Experimental type system extensions for programs checked with the mypy typechecker." +category = "dev" optional = false python-versions = "*" -version = "0.4.3" [[package]] -category = "main" -description = "Python package for creating and manipulating graphs and networks" name = "networkx" +version = "2.5" +description = "Python package for creating and manipulating graphs and networks" +category = "main" optional = false python-versions = ">=3.6" -version = "2.5" [package.dependencies] decorator = ">=4.3.0" @@ -317,222 +309,207 @@ pyyaml = ["pyyaml"] scipy = ["scipy"] [[package]] -category = "main" -description = "Render NetworkX graphs using GraphViz" name = "nxv" +version = "0.1.3" +description = "Render NetworkX graphs using GraphViz" +category = "main" optional = false python-versions = ">=3.6,<4.0" -version = "0.1.3" [package.dependencies] networkx = ">=2.5,<3.0" [[package]] -category = "dev" -description = "Core utilities for Python packages" name = "packaging" +version = "20.8" +description = "Core utilities for Python packages" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "20.4" [package.dependencies] pyparsing = ">=2.0.2" -six = "*" [[package]] -category = "dev" -description = "Utility library for gitignore style pattern matching of file paths." name = "pathspec" +version = "0.8.1" +description = "Utility library for gitignore style pattern matching of file paths." +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "0.8.0" [[package]] -category = "dev" -description = "plugin and hook calling mechanisms for python" name = "pluggy" +version = "0.13.1" +description = "plugin and hook calling mechanisms for python" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "0.13.1" [package.dependencies] -[package.dependencies.importlib-metadata] -python = "<3.8" -version = ">=0.12" +importlib-metadata = {version = ">=0.12", markers = "python_version < \"3.8\""} [package.extras] dev = ["pre-commit", "tox"] [[package]] -category = "dev" -description = "library with cross-python path, ini-parsing, io, code, log facilities" name = "py" +version = "1.10.0" +description = "library with cross-python path, ini-parsing, io, code, log facilities" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "1.9.0" [[package]] -category = "dev" -description = "Python style guide checker" name = "pycodestyle" +version = "2.6.0" +description = "Python style guide checker" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "2.6.0" [[package]] -category = "dev" -description = "passive checker of Python programs" name = "pyflakes" +version = "2.2.0" +description = "passive checker of Python programs" +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" -version = "2.2.0" [[package]] -category = "dev" -description = "Pygments is a syntax highlighting package written in Python." name = "pygments" +version = "2.7.3" +description = "Pygments is a syntax highlighting package written in Python." +category = "dev" optional = false python-versions = ">=3.5" -version = "2.7.1" [[package]] -category = "dev" -description = "Python parsing module" name = "pyparsing" +version = "2.4.7" +description = "Python parsing module" +category = "dev" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*" -version = "2.4.7" [[package]] -category = "dev" -description = "pytest: simple powerful testing with Python" name = "pytest" +version = "5.4.3" +description = "pytest: simple powerful testing with Python" +category = "dev" optional = false python-versions = ">=3.5" -version = "5.4.3" [package.dependencies] -atomicwrites = ">=1.0" +atomicwrites = {version = ">=1.0", markers = "sys_platform == \"win32\""} attrs = ">=17.4.0" -colorama = "*" +colorama = {version = "*", markers = "sys_platform == \"win32\""} +importlib-metadata = {version = ">=0.12", markers = "python_version < \"3.8\""} more-itertools = ">=4.0.0" packaging = "*" pluggy = ">=0.12,<1.0" py = ">=1.5.0" wcwidth = "*" -[package.dependencies.importlib-metadata] -python = "<3.8" -version = ">=0.12" - [package.extras] -checkqa-mypy = ["mypy (v0.761)"] +checkqa-mypy = ["mypy (==v0.761)"] testing = ["argcomplete", "hypothesis (>=3.56)", "mock", "nose", "requests", "xmlschema"] [[package]] -category = "dev" -description = "Pytest plugin for measuring coverage." name = "pytest-cov" +version = "2.10.1" +description = "Pytest plugin for measuring coverage." +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "2.10.1" [package.dependencies] coverage = ">=4.4" pytest = ">=4.6" [package.extras] -testing = ["fields", "hunter", "process-tests (2.0.2)", "six", "pytest-xdist", "virtualenv"] +testing = ["fields", "hunter", "process-tests (==2.0.2)", "six", "pytest-xdist", "virtualenv"] [[package]] -category = "dev" -description = "World timezone definitions, modern and historical" name = "pytz" +version = "2020.5" +description = "World timezone definitions, modern and historical" +category = "dev" optional = false python-versions = "*" -version = "2020.1" [[package]] -category = "dev" -description = "Alternative regular expression module, to replace re." name = "regex" +version = "2020.11.13" +description = "Alternative regular expression module, to replace re." +category = "dev" optional = false python-versions = "*" -version = "2020.7.14" [[package]] -category = "dev" -description = "A Sphinx extension for changelog manipulation" name = "releases" +version = "1.6.3" +description = "A Sphinx extension for changelog manipulation" +category = "dev" optional = false python-versions = "*" -version = "1.6.3" [package.dependencies] semantic-version = "<2.7" sphinx = ">=1.3" [[package]] -category = "dev" -description = "Python HTTP for Humans." name = "requests" +version = "2.25.1" +description = "Python HTTP for Humans." +category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" -version = "2.24.0" [package.dependencies] certifi = ">=2017.4.17" -chardet = ">=3.0.2,<4" +chardet = ">=3.0.2,<5" idna = ">=2.5,<3" -urllib3 = ">=1.21.1,<1.25.0 || >1.25.0,<1.25.1 || >1.25.1,<1.26" +urllib3 = ">=1.21.1,<1.27" [package.extras] security = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)"] -socks = ["PySocks (>=1.5.6,<1.5.7 || >1.5.7)", "win-inet-pton"] +socks = ["PySocks (>=1.5.6,!=1.5.7)", "win-inet-pton"] [[package]] -category = "dev" -description = "A library implementing the 'SemVer' scheme." name = "semantic-version" -optional = false -python-versions = "*" version = "2.6.0" - -[[package]] +description = "A library implementing the 'SemVer' scheme." category = "dev" -description = "Python 2 and 3 compatibility utilities" -name = "six" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*" -version = "1.15.0" +python-versions = "*" [[package]] -category = "dev" -description = "This package provides 26 stemmers for 25 languages generated from Snowball algorithms." name = "snowballstemmer" +version = "2.0.0" +description = "This package provides 26 stemmers for 25 languages generated from Snowball algorithms." +category = "dev" optional = false python-versions = "*" -version = "2.0.0" [[package]] -category = "dev" -description = "Python documentation generator" name = "sphinx" +version = "3.4.2" +description = "Python documentation generator" +category = "dev" optional = false python-versions = ">=3.5" -version = "3.2.1" [package.dependencies] -Jinja2 = ">=2.3" -Pygments = ">=2.0" alabaster = ">=0.7,<0.8" babel = ">=1.3" -colorama = ">=0.3.5" +colorama = {version = ">=0.3.5", markers = "sys_platform == \"win32\""} docutils = ">=0.12" imagesize = "*" +Jinja2 = ">=2.3" packaging = "*" +Pygments = ">=2.0" requests = ">=2.5.0" -setuptools = "*" snowballstemmer = ">=1.1" sphinxcontrib-applehelp = "*" sphinxcontrib-devhelp = "*" @@ -543,31 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type_comments = ["typed-ast (>=1.4.0)"] [[package]] -category = "dev" -description = "Read the Docs theme for Sphinx" name = "sphinx-rtd-theme" +version = "0.5.1" +description = "Read the Docs theme for Sphinx" +category = "dev" optional = false python-versions = "*" -version = "0.5.0" [package.dependencies] sphinx = "*" @@ -576,137 +553,137 @@ sphinx = "*" dev = ["transifex-client", "sphinxcontrib-httpdomain", "bump2version"] [[package]] -category = "dev" -description = "sphinxcontrib-applehelp is a sphinx extension which outputs Apple help books" name = "sphinxcontrib-applehelp" +version = "1.0.2" +description = "sphinxcontrib-applehelp is a sphinx extension which outputs Apple help books" +category = "dev" optional = false python-versions = ">=3.5" -version = "1.0.2" [package.extras] lint = ["flake8", "mypy", "docutils-stubs"] test = ["pytest"] [[package]] -category = "dev" -description = "sphinxcontrib-devhelp is a sphinx extension which outputs Devhelp document." name = 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b/src/uberjob/_execution/run_physical.py @@ -55,7 +55,7 @@ def _create_bound_call_lookup_and_output_slot( plan: Plan, output_node: Optional[Node] = None ): result_lookup = { - node: Slot(node.value if type(node) is Literal else None) + node: node if type(node) is Literal else Slot(None) for node in plan.graph.nodes() } bound_call_lookup = { @@ -74,6 +74,10 @@ class PrepRunPhysical(NamedTuple): plan: Plan +def _default_on_failed(node: Node, e: Exception): + pass + + def prep_run_physical( plan: Plan, *, @@ -88,24 +92,24 @@ def prep_run_physical( plan, output_node ) plan = prune_source_literals(plan, inplace=inplace) + on_started = on_started or identity + on_completed = on_completed or identity + on_failed = on_failed or _default_on_failed retry = retry or identity def process(node): if type(node) is Call: - if on_started is not None: - on_started(node) - + on_started(node) + bound_call = bound_call_lookup[node] try: - bound_call = bound_call_lookup[node] retry(bound_call.value.run)() - bound_call.value = None except Exception as e: - if on_failed is not None: - on_failed(node, e) + on_failed(node, e) raise + finally: + bound_call.value = None - if on_completed is not None: - on_completed(node) + on_completed(node) return PrepRunPhysical(bound_call_lookup, output_slot, process, plan)