- Added JSON VCF header output with --json switch
- Improved README and installation instructions
- Added guix.scm build and instructions (no need for bundler)
- Moved regressiontest into tree
This is an important maintenance release of bio-vcf:
- Rename bioruby-vcf to bio-vcf and migrate project to vcflib
- Fixed tests to match recent Ruby updates
- Getting ready for a 1.0 release
- Released 0.9.2 as a gem
- 0.9.1 removed a rare threading bug and cleanup on error
- Added support for soft filters (request by Brad Chapman)
- The outputter now writes (properly) in parallel with the parser
- bio-vcf turns any VCF into JSON with header information, and allows you to pipe that JSON directly into any JSON supporting language, including Python and Javascript!
For older changes view the git log.