empty result file

[ssscj]

Hi,
thanks for developing Genion. I use Genion to analyse a small dataset of ~14000 reads. The system log file says, "
Normal reads: 14188
Homologous chimeric reads: 1
Fusion candidate chimeric reads: 20"
but the output tsv file, fail file and log file are empty. I set the parameter --min-support to 1, but got the empty files again. So how could I get the reads ID, position and other information of the failed fusion candidates ? Thank you.

[f0t1h]

Thank you for using Genion. I will look into this as soon as possible.

Are you using Genion via conda? Also, is the dataset you've used public?

[ssscj]

I installed Genion from source. And the dataset is from our cooperator, so sorry I could not provide you with the dataset. The dataset is generated on Mus musculus, and I use the reference and annotation of GRCm38 downloaded from ensembl. Thanks.

[f0t1h]

Hi @ssscj can you try running again with the latest commit?