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e4_hybrid_attributes_2.py
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e4_hybrid_attributes_2.py
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"""
Experiment 4 - evaluation on hybrid attributes
stream #1 -> numeric only (15)
stream #2 -> 8 binary, 7 numeric
stream #3 -> 8 categorical(0-3 values), 7 numeric
"""
import strlearn as sl
import numpy as np
import e2_config
from tqdm import tqdm
from methods import Meta, SDDE
from sklearn.naive_bayes import GaussianNB
import matplotlib.pyplot as plt
def binarize(stream, num_binary):
X_np, y_np= stream._make_classification()
for idx in range(num_binary):
feature_values = np.copy(X_np[:,idx])
th = np.mean(feature_values)
X_np[:,idx][feature_values>th]=1
X_np[:,idx][feature_values<=th]=0
file = np.concatenate([X_np, y_np[:,np.newaxis]], axis=1)
np.save('stream_generated.npy', file)
np.savetxt('stream_generated.txt', file)
s = sl.streams.NPYParser("stream_generated.npy", chunk_size=static_params['chunk_size'], n_chunks=static_params['n_chunks'])
return s
def categorize(stream, num_categorical):
X_np, y_np= stream._make_classification()
for idx in range(num_categorical):
feature_values = np.copy(X_np[:,idx])
th_mid = np.mean(feature_values)
th_1 = np.mean(feature_values[feature_values<th_mid])
th_3 = np.mean(feature_values[feature_values>th_mid])
X_np[:,idx][feature_values<th_1]=0
X_np[:,idx][feature_values>=th_1]=1
X_np[:,idx][feature_values>=th_mid]=2
X_np[:,idx][feature_values>=th_3]=3
file = np.concatenate([X_np, y_np[:,np.newaxis]], axis=1)
np.save('stream_generated.npy', file)
np.savetxt('stream_generated.txt', file)
s = sl.streams.NPYParser("stream_generated.npy", chunk_size=static_params['chunk_size'], n_chunks=static_params['n_chunks'])
return s
def find_real_drift(chunks, drifts):
interval = round(chunks/drifts)
arr = np.zeros((chunks))
idx = [interval*(i+.5) for i in range(drifts)]
for i in idx:
arr[int(i)]=2
return arr[1:]
np.random.seed(13654)
replications = e2_config.e2_replications()
random_states = np.random.randint(0, 10000, replications)
static_params = e2_config.e2_static2()
# static_params['n_chunks']=50
# static_params['chunk_size']=50
drf_types = e2_config.e2_drift_types()
metrics = e2_config.metrics()
sensitivity = [.2, .3, .4, .5]
categories = ['num', 'bin', 'cat']
print(len(drf_types), replications)
t = 3*len(sensitivity)*len(drf_types)*replications
pbar = tqdm(total=t)
drifs=5
features=15
real_drf = find_real_drift(static_params['n_chunks'], drifs)
for category in categories:
for drf_type in drf_types:
results_clf = np.zeros((replications, len(sensitivity), static_params['n_chunks']-1))
results_drf_arrs = np.zeros((replications, len(sensitivity), 2, static_params['n_chunks']-1))
for sen_id, sen in enumerate(sensitivity):
for replication in range(replications):
detector= [
Meta(detector = SDDE(n_detectors= features, sensitivity=sen), base_clf = GaussianNB()),
]
str_name = "%s_%s" % (drf_type,category)
config = {
**static_params,
**drf_types[drf_type],
'n_features': features,
'n_informative': features,
'n_drifts': drifs,
'random_state': random_states[replication]
}
#original numeric
stream = sl.streams.StreamGenerator(**config)
if category=='bin':
# binary
stream = binarize(stream, 8)
if category=='cat':
# categorical
stream = categorize(stream, 8)
print("replication: %i, stream: %s, sensitivity: %s" % (replication, str_name, sen))
eval = sl.evaluators.TestThenTrain(metrics=metrics)
eval.process(stream, detector)
scores = eval.scores
results_clf[replication] = scores[:,:,0]
results_drf_arrs[replication, sen_id, 0] = real_drf
results_drf_arrs[replication, sen_id, 1] = np.array(detector[0].detector.drift)
pbar.update(1)
np.save('results_ex4/clf_%s' % str_name, results_clf)
np.save('results_ex4/drf_arr_%s' % str_name, results_drf_arrs)
pbar.close()