-
Notifications
You must be signed in to change notification settings - Fork 2
/
NAMESPACE
68 lines (67 loc) · 1.5 KB
/
NAMESPACE
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
# Generated by roxygen2: do not edit by hand
export(E)
export(En)
export(Export)
export(G)
export(Graph)
export(GraphSet)
export(V)
export(Vn)
export(alleleClusterDistr)
export(allelicCoMatrix)
export(assignPairID)
export(betaSignCongruence)
export(calcAllelicDiveristyPerCountry)
export(calcGeneFreq)
export(compEdgeOccur)
export(comparePvalues)
export(compileGraphs)
export(corCladeProj)
export(corPatternProj)
export(countAlleles)
export(countAllelesPerCountry)
export(countAllelesPerGeneByCountry)
export(countAllelesPerGeneByYear)
export(countAllelesPerYear)
export(countGeneClassLinks)
export(countNeighbours)
export(drawHeatMap)
export(evalPL)
export(extractPairedRows)
export(extractSubgraphs)
export(findMinIncClade)
export(findMinIncCladeOfStrains)
export(findPhysLink)
export(findSeq)
export(getAllelesEarliestAppearance)
export(getAllelesPerPattern)
export(getAssocGenePair)
export(getClusterMemberCooccurrence)
export(getGeneClass)
export(getRowsXY)
export(heatMapPAM)
export(importAllelicPAM)
export(importCoreGenomeSNPs)
export(importGeneticPAM)
export(importPhysicalDists)
export(lmm)
export(mergeIddAlleles)
export(mkCoocurNetwork)
export(mkFilterTSV)
export(mkNetwork)
export(nE)
export(nV)
export(plr)
export(projectSamples)
export(retrieveAlleleSetInfo)
export(ringPlotPAM)
export(screePlotPCs)
export(showGeneContent)
export(summariseCliques)
export(summariseDist)
export(summariseDistsForEdges)
export(summarisePhysDistForClusters)
export(tempNet)
export(testForStruEff)
export(tree2Clades)
export(vertexAttr2Size)