From 30a4c0bd50456d2c40880b61d7175daaf00a3ac0 Mon Sep 17 00:00:00 2001
From: fhamood <firas.hamood@yahoo.de>
Date: Mon, 4 Nov 2024 18:53:01 +0100
Subject: [PATCH] switch to ptm_pipeline version of spectrum_io

---
 pyproject.toml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pyproject.toml b/pyproject.toml
index fac9f1f..38bf5bd 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -30,7 +30,7 @@ mokapot = ">=0.9.1,<0.11.0"
 numpy = ">=1.20,<1.25"
 seaborn = ">=0.12.2,<0.14.0"
 spectrum-fundamentals = ">=0.7.8,<0.8.0"
-spectrum-io = ">=0.6.4,<0.7.0"
+spectrum-io = { git = "https://github.com/wilhelm-lab/spectrum_io.git", branch = "features/ptm_pipeline" }
 picked_group_fdr = ">=0.7.1"
 
 #dlomix = {extras = ["rltl-report", "wandb"], url="https://github.com/wilhelm-lab/dlomix/tarball/feature/bmpc", optional = true}