-
Notifications
You must be signed in to change notification settings - Fork 0
/
viewVariantAndPhenotype.php
executable file
·206 lines (188 loc) · 21.7 KB
/
viewVariantAndPhenotype.php
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
<link rel="stylesheet" href="https://code.jquery.com/ui/1.13.1/themes/base/jquery-ui.css"></link>
<script src="https://code.jquery.com/jquery-3.6.0.min.js" integrity="sha256-/xUj+3OJU5yExlq6GSYGSHk7tPXikynS7ogEvDej/m4=" crossorigin="anonymous"></script>
<script src="https://code.jquery.com/ui/1.13.1/jquery-ui.js"></script>
<style>
.ui-accordion-header.ui-state-active {
background-color: green;
}
</style>
<script>
$(function() {
$("#accordion").accordion({
active: false,
collapsible: true
});
});
</script>
<?php
$TITLE = "Soybean Genomic Variations Explorer";
// include '../header.php';
include '../config.php';
include './php/pdoResultFilter.php';
?>
<!-- Get and process the variables -->
<?php
$chromosome = $_GET['chromosome'];
$position = $_GET['position'];
$genotype = $_GET['genotype'];
$chromosome = trim($chromosome);
$position = intval(trim($position));
$genotype = trim($genotype);
?>
<?php
echo "<div id=\"accordion\">";
echo "<h3>Coordinate</h3>";
echo "<div>";
echo "<label for=\"chromosome_1\">Chromosome:</label>";
echo "<input type=\"text\" id=\"chromosome_1\" name=\"chromosome_1\" size=\"30\" value=\"" . $chromosome . "\" style=\"margin-right:50px;\">";
echo "<label for=\"position_1\">Position:</label>";
echo "<input type=\"text\" id=\"position_1\" name=\"position_1\" size=\"30\" value=\"" . $position . "\" style=\"margin-right:50px;\">";
echo "</div>";
echo "<h3>Genotype</h3>";
echo "<div id=\"div_genotype_in_accordion\">";
echo "</div>";
echo "<h3>Chemical Descriptor</h3>";
echo "<div>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_0\" name=\"chemical_descriptor_0\" value=\"ARGININE\"><label for=\"chemical_descriptor_0\" style=\"margin-right:10px;\">ARGININE</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_1\" name=\"chemical_descriptor_1\" value=\"CYSTEINE\"><label for=\"chemical_descriptor_1\" style=\"margin-right:10px;\">CYSTEINE</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_2\" name=\"chemical_descriptor_2\" value=\"FATTYACIDS\"><label for=\"chemical_descriptor_2\" style=\"margin-right:10px;\">FATTYACIDS</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_3\" name=\"chemical_descriptor_3\" value=\"IODINENUM\"><label for=\"chemical_descriptor_3\" style=\"margin-right:10px;\">IODINENUM</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_4\" name=\"chemical_descriptor_4\" value=\"ISOLEUCINE\"><label for=\"chemical_descriptor_4\" style=\"margin-right:10px;\">ISOLEUCINE</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_5\" name=\"chemical_descriptor_5\" value=\"LEUCINE\"><label for=\"chemical_descriptor_5\" style=\"margin-right:10px;\">LEUCINE</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_6\" name=\"chemical_descriptor_6\" value=\"LINOLEIC\"><label for=\"chemical_descriptor_6\" style=\"margin-right:10px;\">LINOLEIC</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_7\" name=\"chemical_descriptor_7\" value=\"LINOLENIC\"><label for=\"chemical_descriptor_7\" style=\"margin-right:10px;\">LINOLENIC</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_8\" name=\"chemical_descriptor_8\" value=\"LYSINE\"><label for=\"chemical_descriptor_8\" style=\"margin-right:10px;\">LYSINE</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_9\" name=\"chemical_descriptor_9\" value=\"METHIONINE\"><label for=\"chemical_descriptor_9\" style=\"margin-right:10px;\">METHIONINE</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_10\" name=\"chemical_descriptor_10\" value=\"OIL\"><label for=\"chemical_descriptor_10\" style=\"margin-right:10px;\">OIL</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_11\" name=\"chemical_descriptor_11\" value=\"OLEIC\"><label for=\"chemical_descriptor_11\" style=\"margin-right:10px;\">OLEIC</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_12\" name=\"chemical_descriptor_12\" value=\"P34\"><label for=\"chemical_descriptor_12\" style=\"margin-right:10px;\">P34</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_13\" name=\"chemical_descriptor_13\" value=\"PALMITIC\"><label for=\"chemical_descriptor_13\" style=\"margin-right:10px;\">PALMITIC</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_14\" name=\"chemical_descriptor_14\" value=\"PETUREIDE\"><label for=\"chemical_descriptor_14\" style=\"margin-right:10px;\">PETUREIDE</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_15\" name=\"chemical_descriptor_15\" value=\"PROTEIN\"><label for=\"chemical_descriptor_15\" style=\"margin-right:10px;\">PROTEIN</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_16\" name=\"chemical_descriptor_16\" value=\"STACHYOSE\"><label for=\"chemical_descriptor_16\" style=\"margin-right:10px;\">STACHYOSE</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_17\" name=\"chemical_descriptor_17\" value=\"STEARIC\"><label for=\"chemical_descriptor_17\" style=\"margin-right:10px;\">STEARIC</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_18\" name=\"chemical_descriptor_18\" value=\"SUCROSE\"><label for=\"chemical_descriptor_18\" style=\"margin-right:10px;\">SUCROSE</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_19\" name=\"chemical_descriptor_19\" value=\"THREONINE\"><label for=\"chemical_descriptor_19\" style=\"margin-right:10px;\">THREONINE</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_20\" name=\"chemical_descriptor_20\" value=\"TRYPTOPHAN\"><label for=\"chemical_descriptor_20\" style=\"margin-right:10px;\">TRYPTOPHAN</label>";
echo "<input type=\"checkbox\" id=\"chemical_descriptor_21\" name=\"chemical_descriptor_21\" value=\"VALINE\"><label for=\"chemical_descriptor_21\" style=\"margin-right:10px;\">VALINE</label>";
echo "</div>";
echo "<h3>Disease Descriptor</h3>";
echo "<div>";
echo "<input type=\"checkbox\" id=\"disease_descriptor_0\" name=\"disease_descriptor_0\" value=\"BP\"><label for=\"disease_descriptor_0\" style=\"margin-right:10px;\">BP</label>";
echo "<input type=\"checkbox\" id=\"disease_descriptor_1\" name=\"disease_descriptor_1\" value=\"BPMV\"><label for=\"disease_descriptor_1\" style=\"margin-right:10px;\">BPMV</label>";
echo "<input type=\"checkbox\" id=\"disease_descriptor_2\" name=\"disease_descriptor_2\" value=\"BRNSTEMROT\"><label for=\"disease_descriptor_2\" style=\"margin-right:10px;\">BRNSTEMROT</label>";
echo "<input type=\"checkbox\" id=\"disease_descriptor_3\" name=\"disease_descriptor_3\" value=\"FROGEYE\"><label for=\"disease_descriptor_3\" style=\"margin-right:10px;\">FROGEYE</label>";
echo "<input type=\"checkbox\" id=\"disease_descriptor_4\" name=\"disease_descriptor_4\" value=\"FROGEYE2\"><label for=\"disease_descriptor_4\" style=\"margin-right:10px;\">FROGEYE2</label>";
echo "<input type=\"checkbox\" id=\"disease_descriptor_5\" name=\"disease_descriptor_5\" value=\"FROGEYE3\"><label for=\"disease_descriptor_5\" style=\"margin-right:10px;\">FROGEYE3</label>";
echo "<input type=\"checkbox\" id=\"disease_descriptor_6\" name=\"disease_descriptor_6\" value=\"NSCANKER\"><label for=\"disease_descriptor_6\" style=\"margin-right:10px;\">NSCANKER</label>";
echo "<input type=\"checkbox\" id=\"disease_descriptor_7\" name=\"disease_descriptor_7\" value=\"PHYTOROT\"><label for=\"disease_descriptor_7\" style=\"margin-right:10px;\">PHYTOROT</label>";
echo "<input type=\"checkbox\" id=\"disease_descriptor_8\" name=\"disease_descriptor_8\" value=\"PMV\"><label for=\"disease_descriptor_8\" style=\"margin-right:10px;\">PMV</label>";
echo "</div>";
echo "<h3>Growth Descriptor</h3>";
echo "<div>";
echo "<input type=\"checkbox\" id=\"growth_descriptor_0\" name=\"growth_descriptor_0\" value=\"HEIGHT\"><label for=\"growth_descriptor_0\" style=\"margin-right:10px;\">HEIGHT</label>";
echo "<input type=\"checkbox\" id=\"growth_descriptor_1\" name=\"growth_descriptor_1\" value=\"STEMTERM\"><label for=\"growth_descriptor_1\" style=\"margin-right:10px;\">STEMTERM</label>";
echo "</div>";
echo "<h3>Insect Descriptor</h3>";
echo "<div>";
echo "<input type=\"checkbox\" id=\"insect_descriptor_0\" name=\"insect_descriptor_0\" value=\"APHID\"><label for=\"insect_descriptor_0\" style=\"margin-right:10px;\">APHID</label>";
echo "<input type=\"checkbox\" id=\"insect_descriptor_1\" name=\"insect_descriptor_1\" value=\"BAW\"><label for=\"insect_descriptor_1\" style=\"margin-right:10px;\">BAW</label>";
echo "<input type=\"checkbox\" id=\"insect_descriptor_2\" name=\"insect_descriptor_2\" value=\"EARWORM\"><label for=\"insect_descriptor_2\" style=\"margin-right:10px;\">EARWORM</label>";
echo "<input type=\"checkbox\" id=\"insect_descriptor_3\" name=\"insect_descriptor_3\" value=\"LOOPER\"><label for=\"insect_descriptor_3\" style=\"margin-right:10px;\">LOOPER</label>";
echo "<input type=\"checkbox\" id=\"insect_descriptor_4\" name=\"insect_descriptor_4\" value=\"MEXBEANBTL\"><label for=\"insect_descriptor_4\" style=\"margin-right:10px;\">MEXBEANBTL</label>";
echo "<input type=\"checkbox\" id=\"insect_descriptor_5\" name=\"insect_descriptor_5\" value=\"POTATOLHOP\"><label for=\"insect_descriptor_5\" style=\"margin-right:10px;\">POTATOLHOP</label>";
echo "<input type=\"checkbox\" id=\"insect_descriptor_6\" name=\"insect_descriptor_6\" value=\"VBC\"><label for=\"insect_descriptor_6\" style=\"margin-right:10px;\">VBC</label>";
echo "</div>";
echo "<h3>Morphology Descriptor</h3>";
echo "<div>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_0\" name=\"morphology_descriptor_0\" value=\"BRANCHING\"><label for=\"morphology_descriptor_0\" style=\"margin-right:10px;\">BRANCHING</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_1\" name=\"morphology_descriptor_1\" value=\"HILUMCOLOR\"><label for=\"morphology_descriptor_1\" style=\"margin-right:10px;\">HILUMCOLOR</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_2\" name=\"morphology_descriptor_2\" value=\"LEAFSHAPE\"><label for=\"morphology_descriptor_2\" style=\"margin-right:10px;\">LEAFSHAPE</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_3\" name=\"morphology_descriptor_3\" value=\"LEAFSIZE\"><label for=\"morphology_descriptor_3\" style=\"margin-right:10px;\">LEAFSIZE</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_4\" name=\"morphology_descriptor_4\" value=\"LODGING\"><label for=\"morphology_descriptor_4\" style=\"margin-right:10px;\">LODGING</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_5\" name=\"morphology_descriptor_5\" value=\"LOWERLFSHP\"><label for=\"morphology_descriptor_5\" style=\"margin-right:10px;\">LOWERLFSHP</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_6\" name=\"morphology_descriptor_6\" value=\"LOWLEAFAR\"><label for=\"morphology_descriptor_6\" style=\"margin-right:10px;\">LOWLEAFAR</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_7\" name=\"morphology_descriptor_7\" value=\"LOWLEAFASP\"><label for=\"morphology_descriptor_7\" style=\"margin-right:10px;\">LOWLEAFASP</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_8\" name=\"morphology_descriptor_8\" value=\"MOTTLING\"><label for=\"morphology_descriptor_8\" style=\"margin-right:10px;\">MOTTLING</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_9\" name=\"morphology_descriptor_9\" value=\"OTHERLEAF\"><label for=\"morphology_descriptor_9\" style=\"margin-right:10px;\">OTHERLEAF</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_10\" name=\"morphology_descriptor_10\" value=\"OTHERPLANT\"><label for=\"morphology_descriptor_10\" style=\"margin-right:10px;\">OTHERPLANT</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_11\" name=\"morphology_descriptor_11\" value=\"OTHERSEED\"><label for=\"morphology_descriptor_11\" style=\"margin-right:10px;\">OTHERSEED</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_12\" name=\"morphology_descriptor_12\" value=\"PODCOLOR\"><label for=\"morphology_descriptor_12\" style=\"margin-right:10px;\">PODCOLOR</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_13\" name=\"morphology_descriptor_13\" value=\"PODLENGTH\"><label for=\"morphology_descriptor_13\" style=\"margin-right:10px;\">PODLENGTH</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_14\" name=\"morphology_descriptor_14\" value=\"PUBCOLOR\"><label for=\"morphology_descriptor_14\" style=\"margin-right:10px;\">PUBCOLOR</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_15\" name=\"morphology_descriptor_15\" value=\"PUBDENSITY\"><label for=\"morphology_descriptor_15\" style=\"margin-right:10px;\">PUBDENSITY</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_16\" name=\"morphology_descriptor_16\" value=\"PUBFORM\"><label for=\"morphology_descriptor_16\" style=\"margin-right:10px;\">PUBFORM</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_17\" name=\"morphology_descriptor_17\" value=\"SCOATCOLOR\"><label for=\"morphology_descriptor_17\" style=\"margin-right:10px;\">SCOATCOLOR</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_18\" name=\"morphology_descriptor_18\" value=\"SCOATLUST\"><label for=\"morphology_descriptor_18\" style=\"margin-right:10px;\">SCOATLUST</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_19\" name=\"morphology_descriptor_19\" value=\"SEEDQUAL\"><label for=\"morphology_descriptor_19\" style=\"margin-right:10px;\">SEEDQUAL</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_20\" name=\"morphology_descriptor_20\" value=\"SEEDSHAPE1\"><label for=\"morphology_descriptor_20\" style=\"margin-right:10px;\">SEEDSHAPE1</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_21\" name=\"morphology_descriptor_21\" value=\"SEEDSHAPE2\"><label for=\"morphology_descriptor_21\" style=\"margin-right:10px;\">SEEDSHAPE2</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_22\" name=\"morphology_descriptor_22\" value=\"SEEDWEIGHT\"><label for=\"morphology_descriptor_22\" style=\"margin-right:10px;\">SEEDWEIGHT</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_23\" name=\"morphology_descriptor_23\" value=\"SHATEARLY\"><label for=\"morphology_descriptor_23\" style=\"margin-right:10px;\">SHATEARLY</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_24\" name=\"morphology_descriptor_24\" value=\"SHATLATE\"><label for=\"morphology_descriptor_24\" style=\"margin-right:10px;\">SHATLATE</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_25\" name=\"morphology_descriptor_25\" value=\"TERMSCORE\"><label for=\"morphology_descriptor_25\" style=\"margin-right:10px;\">TERMSCORE</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_26\" name=\"morphology_descriptor_26\" value=\"UPPERLFLEN\"><label for=\"morphology_descriptor_26\" style=\"margin-right:10px;\">UPPERLFLEN</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_27\" name=\"morphology_descriptor_27\" value=\"UPPERLFSHP\"><label for=\"morphology_descriptor_27\" style=\"margin-right:10px;\">UPPERLFSHP</label>";
echo "<input type=\"checkbox\" id=\"morphology_descriptor_28\" name=\"morphology_descriptor_28\" value=\"FLWRCOLOR\"><label for=\"morphology_descriptor_28\" style=\"margin-right:10px;\">FLWRCOLOR</label>";
echo "</div>";
echo "<h3>Other Descriptor</h3>";
echo "<div>";
echo "<input type=\"checkbox\" id=\"other_descriptor_0\" name=\"other_descriptor_0\" value=\"ACIMPT\"><label for=\"other_descriptor_0\" style=\"margin-right:10px;\">ACIMPT</label>";
echo "<input type=\"checkbox\" id=\"other_descriptor_1\" name=\"other_descriptor_1\" value=\"YIELD\"><label for=\"other_descriptor_1\" style=\"margin-right:10px;\">YIELD</label>";
echo "<input type=\"checkbox\" id=\"other_descriptor_2\" name=\"other_descriptor_2\" value=\"FLUORESCE\"><label for=\"other_descriptor_2\" style=\"margin-right:10px;\">FLUORESCE</label>";
echo "<input type=\"checkbox\" id=\"other_descriptor_3\" name=\"other_descriptor_3\" value=\"LATITUDE\"><label for=\"other_descriptor_3\" style=\"margin-right:10px;\">LATITUDE</label>";
echo "<input type=\"checkbox\" id=\"other_descriptor_4\" name=\"other_descriptor_4\" value=\"LONGITUDE\"><label for=\"other_descriptor_4\" style=\"margin-right:10px;\">LONGITUDE</label>";
echo "</div>";
echo "<h3>Nematode Descriptor</h3>";
echo "<div>";
echo "<input type=\"checkbox\" id=\"nematode_descriptor_0\" name=\"nematode_descriptor_0\" value=\"NEMATCYST\"><label for=\"nematode_descriptor_0\" style=\"margin-right:10px;\">NEMATCYST</label>";
echo "<input type=\"checkbox\" id=\"nematode_descriptor_1\" name=\"nematode_descriptor_1\" value=\"NEMATCYST_01\"><label for=\"nematode_descriptor_1\" style=\"margin-right:10px;\">NEMATCYST_01</label>";
echo "<input type=\"checkbox\" id=\"nematode_descriptor_2\" name=\"nematode_descriptor_2\" value=\"NEMATCYST_02\"><label for=\"nematode_descriptor_2\" style=\"margin-right:10px;\">NEMATCYST_02</label>";
echo "<input type=\"checkbox\" id=\"nematode_descriptor_3\" name=\"nematode_descriptor_3\" value=\"NEMATCYST_03\"><label for=\"nematode_descriptor_3\" style=\"margin-right:10px;\">NEMATCYST_03</label>";
echo "<input type=\"checkbox\" id=\"nematode_descriptor_4\" name=\"nematode_descriptor_4\" value=\"NEMATCYST_04\"><label for=\"nematode_descriptor_4\" style=\"margin-right:10px;\">NEMATCYST_04</label>";
echo "<input type=\"checkbox\" id=\"nematode_descriptor_5\" name=\"nematode_descriptor_5\" value=\"NEMATCYST_05\"><label for=\"nematode_descriptor_5\" style=\"margin-right:10px;\">NEMATCYST_05</label>";
echo "<input type=\"checkbox\" id=\"nematode_descriptor_6\" name=\"nematode_descriptor_6\" value=\"NEMATCYST_14\"><label for=\"nematode_descriptor_6\" style=\"margin-right:10px;\">NEMATCYST_14</label>";
echo "<input type=\"checkbox\" id=\"nematode_descriptor_7\" name=\"nematode_descriptor_7\" value=\"RENIFORM_NEMATODE\"><label for=\"nematode_descriptor_7\" style=\"margin-right:10px;\">RENIFORM_NEMATODE</label>";
echo "</div>";
echo "<h3>Phenology Descriptor</h3>";
echo "<div>";
echo "<input type=\"checkbox\" id=\"phenology_descriptor_0\" name=\"phenology_descriptor_0\" value=\"FLOWERDATE\"><label for=\"phenology_descriptor_0\" style=\"margin-right:10px;\">FLOWERDATE</label>";
echo "<input type=\"checkbox\" id=\"phenology_descriptor_1\" name=\"phenology_descriptor_1\" value=\"MATDATE\"><label for=\"phenology_descriptor_1\" style=\"margin-right:10px;\">MATDATE</label>";
echo "<input type=\"checkbox\" id=\"phenology_descriptor_2\" name=\"phenology_descriptor_2\" value=\"MATGROUP\"><label for=\"phenology_descriptor_2\" style=\"margin-right:10px;\">MATGROUP</label>";
echo "<input type=\"checkbox\" id=\"phenology_descriptor_3\" name=\"phenology_descriptor_3\" value=\"TWINING\"><label for=\"phenology_descriptor_3\" style=\"margin-right:10px;\">TWINING</label>";
echo "</div>";
echo "<h3>Qualifier</h3>";
echo "<div>";
echo "<input type=\"checkbox\" id=\"qualifier_0\" name=\"qualifier_0\" value=\"PYTHIUMROT\"><label for=\"qualifier_0\" style=\"margin-right:10px;\">PYTHIUMROT</label>";
echo "<input type=\"checkbox\" id=\"qualifier_1\" name=\"qualifier_1\" value=\"RUST\"><label for=\"qualifier_1\" style=\"margin-right:10px;\">RUST</label>";
echo "<input type=\"checkbox\" id=\"qualifier_2\" name=\"qualifier_2\" value=\"SDS\"><label for=\"qualifier_2\" style=\"margin-right:10px;\">SDS</label>";
echo "<input type=\"checkbox\" id=\"qualifier_3\" name=\"qualifier_3\" value=\"SMV\"><label for=\"qualifier_3\" style=\"margin-right:10px;\">SMV</label>";
echo "<input type=\"checkbox\" id=\"qualifier_4\" name=\"qualifier_4\" value=\"SSCANKER\"><label for=\"qualifier_4\" style=\"margin-right:10px;\">SSCANKER</label>";
echo "</div>";
echo "<h3>Stress Descriptor</h3>";
echo "<div>";
echo "<input type=\"checkbox\" id=\"stress_descriptor_0\" name=\"stress_descriptor_0\" value=\"CHLOROSIS\"><label for=\"stress_descriptor_0\" style=\"margin-right:10px;\">CHLOROSIS</label>";
echo "<input type=\"checkbox\" id=\"stress_descriptor_1\" name=\"stress_descriptor_1\" value=\"HIGHTEMP\"><label for=\"stress_descriptor_1\" style=\"margin-right:10px;\">HIGHTEMP</label>";
echo "<input type=\"checkbox\" id=\"stress_descriptor_2\" name=\"stress_descriptor_2\" value=\"SALTREACT\"><label for=\"stress_descriptor_2\" style=\"margin-right:10px;\">SALTREACT</label>";
echo "</div>";
echo "</div>";
echo "<br/><br/>";
echo "<div style='margin-top:10px;' align='center'>";
echo "<button onclick=\"uncheck_all_genotype()\" style=\"margin-right:20px; background-color: #FFFFFF;\">Uncheck All Genotypes</button>";
echo "<button onclick=\"check_all_genotype()\" style=\"margin-right:20px; background-color: #FFFFFF;\">Check All Genotypes</button>";
echo "<button onclick=\"uncheck_all_phenotypes()\" style=\"margin-right:20px; background-color: #FFFFFF;\">Uncheck All Phenotypes</button>";
echo "<button onclick=\"check_all_phenotypes()\" style=\"margin-right:20px; background-color: #FFFFFF;\">Check All Phenotypes</button>";
echo "<button onclick=\"queryVariantAndPhenotype()\" style=\"margin-right:20px; background-color: #DDFFDD;\">View Data</button>";
echo "<button onclick=\"downloadVariantAndPhenotype()\" style=\"margin-right:20px; background-color: #FFFFFF;\">Download Data</button>";
echo "</div>";
echo "<br/><br/>";
echo "<div id=\"Variant_and_Phenotye_detail_table\" style='width:auto; height:auto; overflow:scroll; max-height:1000px;'></div>";
?>
<script type="text/javascript" language="javascript" src="./js/viewVariantAndPhenotype.js"></script>
<script type="text/javascript" language="javascript">
var chromosome = <?php if(isset($chromosome)) {echo json_encode($chromosome, JSON_INVALID_UTF8_IGNORE);} else {echo "";}?>;
var position = <?php if(isset($position)) {echo json_encode($position, JSON_INVALID_UTF8_IGNORE);} else {echo "";}?>;
var genotype = <?php if(isset($genotype)) {echo json_encode($genotype, JSON_INVALID_UTF8_IGNORE);} else {echo "";}?>;
updateGenotypeInAccordion(genotype);
</script>
<?php include '../footer.php'; ?>