Merge pull request #54 from ABbiodiversity/development

wildRtrax v1.2 build

CODE_OF_CONDUCT.md

@@ -59,7 +59,7 @@ representative at an online or offline event.
 ## Enforcement
 
 Instances of abusive, harassing, or otherwise unacceptable behavior may be
-reported to the community leaders responsible for enforcement at mabecker@ualberta.ca. 
+reported to the community leaders responsible for enforcement at <agmacpha@ualberta.ca> and <mabecker@ualberta.ca>. 
 All complaints will be reviewed and investigated promptly and fairly.
 
 All community leaders are obligated to respect the privacy and security of the
@@ -113,7 +113,7 @@ community.
 
 ## Attribution
 
-This Code of Conduct is adapted from the [Contributor Covenant][homepage],
+This Code of Conduct is adapted from the Contributor Covenant homepage,
 version 2.1, available at
 <https://www.contributor-covenant.org/version/2/1/code_of_conduct.html>.
 

DESCRIPTION

@@ -1,62 +1,64 @@
 Package: wildRtrax
 Title: Environmental sensor data management and analytics to and from WildTrax
-Version: 1.1.0
+Version: 1.2.0
 Authors@R: 
     c(person(given = "Alex",
            family = "MacPhail",
            role = c("aut", "cre"),
            email = "agmacpha@ualberta.ca"),
       person(given = "Marcus",
              family = "Becker",
-             role = c("aut", "cre"),
+             role = c("aut","cre"),
              email = "mabecker@ualberta.ca"),
       person(given = "Elly",
              family = "Knight",
              role = "aut",
              email = "ecknight@ualberta.ca"))
-Author: Alex MacPhail
+Author: Alex MacPhail <agmacpha@ualberta.ca>
 Maintainer: Marcus Becker <mabecker@ualberta.ca>
-Description: wildRtrax is an R package that enables environmental sensor data users to create comprehensive work flows for managing and analyzing data.
+Description: wildRtrax is an R package that enables environmental sensor users to create comprehensive work flows for managing and analyzing data.
 Depends: R (>= 4.1.0)
 License: MIT + file LICENSE
 Imports:
     dplyr (>= 1.0.0),
-    future,
     fs,
     furrr,
-    tibble,
-    tidyr (>= 1.0.2),
-    lubridate,
-    tools,
-    pipeR,
-    tuneR,
+    future,
+    ggplot2,
+    httr,
     intrval,
     jsonlite,
+    lubridate,
     magick,
-    readr,
-    sf,
-    stringr,
-    tidyverse,
+    magrittr,
+    markdown,
+    pipeR,
+    progressr,
     purrr,
+    QPAD,
+    readr,
     rlang,
-    unmarked,
+    rmarkdown,
     seewave,
+    sf,
+    stringr,
     suntools,
     terra,
-    httr,
-    progressr,
-    rmarkdown,
-    markdown,
-    QPAD
+    tibble,
+    tidyr (>= 1.0.2),
+    tools,
+    tuneR,
+    unmarked,
+    vembedr
 Suggests: 
+    knitr,
     testthat (>= 3.0.0),
-    usethis,
-    knitr
+    usethis
 Remotes: psolymos/QPAD
 VignetteBuilder: knitr
 Encoding: UTF-8
 LazyData: true
 Roxygen: list(markdown = TRUE)
-RoxygenNote: 7.2.3
+RoxygenNote: 7.3.1
 Config/testthat/edition: 3
 URL: https://abbiodiversity.github.io/wildRtrax/

NAMESPACE

@@ -29,6 +29,7 @@ import(dplyr)
 import(fs)
 import(furrr)
 import(future)
+import(ggplot2)
 import(httr)
 import(intrval)
 import(jsonlite)
@@ -39,29 +40,14 @@ import(pipeR)
 import(progressr)
 import(purrr)
 import(readr)
+import(rlang)
 import(seewave)
 import(sf)
 import(stringr)
 import(terra)
 import(tibble)
 import(tidyr)
-import(tidyverse)
 import(tools)
 import(tuneR)
-importFrom(dplyr,across)
-importFrom(dplyr,everything)
-importFrom(dplyr,mutate)
-importFrom(dplyr,select)
-importFrom(httr,content)
-importFrom(lubridate,with_tz)
-importFrom(lubridate,yday)
-importFrom(lubridate,year)
-importFrom(lubridate,ymd_hms)
-importFrom(rlang,current_env)
-importFrom(rlang,env_has)
-importFrom(rlang,is_missing)
-importFrom(seewave,spectro)
-importFrom(stringr,str_detect)
-importFrom(suntools,sunriset)
-importFrom(unmarked,unmarkedFrameOccu)
-importFrom(utils,read.csv)
+import(unmarked)
+import(utils)

NEWS.md

@@ -1,3 +1,16 @@
+# wildRtrax 1.2.0
+
+## Major changes
+
+* `wt_chop()` now recurses across all input files
+* Moving geospatial assets to new repository to lighten package size. Asset requests are now made only through usage of `wt_qpad_offsets()`.
+
+## Minor changes
+
+* Improvements to APIs and acoustic convenience functions to resolve issues and PRs
+* Improvements to test suite, testing dependencies, code coverage
+* Addition of [Camera data wrangling vignette](https://abbiodiversity.github.io/wildRtrax/articles/camera-data-wrangling.html) and additional [tutorials](https://abbiodiversity.github.io/wildRtrax/articles/tutorials.html)
+
 # wildRtrax 1.1.0
 
 ## Major changes

R/.gitignore

@@ -22,3 +22,4 @@ Untitled1.R
 circles.R
 test.R
 sdbo.R
+aJasj.R