DEPENDENCIES

All computations are done on Cartesius of Surfsara.

The python 3.7 virtual environment used to run the analysis is saved as conda_list.txt in the documentation folder.

The 'run' scripts that enable scheduled (parallel) computing on Cartesius use sbatch.

WORKFLOW

1. time averaging selected fields of monthly output .nc files to yearly averaged .nc files
2. analysis scripts

FILE OVERVIEW

/doc: Documentation

(non-tracked files, including model documentation pdf's)

/src/ (source code)

python files

• constants.py
• grid.py
• maps.py
• OHC.py
• paths.py
• plotting.py
• read_binary.py
• regions.py
• timesries.py
• xr_DataArrays
• xr_integration
• xr_regression

ipython notebooks

• currents
• data_overview
• geometry
• GMST
• OHC
• SHF
• SST
• timeseries
• winds

/src/ipynb/ (ipython notebooks including output)

• copy_stripped_notebooks makes a copy of the ipynb's with output and strips it out

/src/run/ (scripts and python files to run in parallel)

• run_OHC_integrals
• run_yrly_avg

/src/test/ (test suite)

• test_xr_integrals.py