Fix join

AlexsLemonade · Feb 1, 2020 · e8d4148 · e8d4148
1 parent 8860856
commit e8d4148
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Showing 3 changed files with 25 additions and 19 deletions.
diff --git a/analyses/molecular-subtyping-embryonal/04-table-prep.Rmd b/analyses/molecular-subtyping-embryonal/04-table-prep.Rmd
@@ -526,7 +526,7 @@ subtypes_df <- bind_rows(
 
 subtypes_df <- all_data_df %>%
   select(contains("ID")) %>%
-  left_join(subtypes_df) %>%
+  full_join(subtypes_df) %>%
   replace_na(list(molecular_subtype = "CNS Embryonal, NOS"))
 ```
 

diff --git a/analyses/molecular-subtyping-embryonal/04-table-prep.nb.html b/analyses/molecular-subtyping-embryonal/04-table-prep.nb.html
diff --git a/analyses/molecular-subtyping-embryonal/results/embryonal_tumor_molecular_subtypes.tsv b/analyses/molecular-subtyping-embryonal/results/embryonal_tumor_molecular_subtypes.tsv
@@ -27,3 +27,4 @@ PT_NBY8PZR9	7316-871	BS_Z9NCH2XA	NA	CNS Embryonal, NOS
 PT_FZHGKJ0H	7316-4033	BS_NHMPQ8Q1	BS_JBGZ7HHZ	CNS Embryonal, NOS
 PT_VBG3Z18B	7316-512	NA	BS_ZQKGJD70	CNS Embryonal, NOS
 PT_00G007DM	7316-272	BS_K07KNTFY	BS_QWNBZ9RJ	ETMR, C19MC-altered
+PT_80NVYCBS	7316-765	NA	BS_KSKZ9J7J	CNS HGNET-MN1