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Evaluation step TP53 classifier #385

Merged
merged 22 commits into from
Jan 10, 2020
Merged

Evaluation step TP53 classifier #385

merged 22 commits into from
Jan 10, 2020

Commits on Dec 31, 2019

  1. evaluation script and plots

    @kgaonkar6
    kgaonkar6 committed Dec 31, 2019
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  2. evaluation plots for classifier

    @kgaonkar6
    kgaonkar6 committed Dec 31, 2019
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  3. added plots TP53

    @kgaonkar6
    kgaonkar6 committed Dec 31, 2019
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  4. added plots TP53

    @kgaonkar6
    kgaonkar6 committed Dec 31, 2019
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  5. evaluation script

    @kgaonkar6
    kgaonkar6 committed Dec 31, 2019
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  6. evaluation script

    @kgaonkar6
    kgaonkar6 committed Dec 31, 2019
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  7. add NF1 plots

    @kgaonkar6
    kgaonkar6 committed Dec 31, 2019
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Commits on Jan 2, 2020

  1. updated TP53 NF1 gencode cds snv alt

    @kgaonkar6
    kgaonkar6 committed Jan 2, 2020
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Commits on Jan 5, 2020

  1. Merge branch 'master' into validation_step

    @jaclyn-taroni
    jaclyn-taroni authored Jan 5, 2020
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Commits on Jan 6, 2020

  1. adding clinical to status file; rerun

    @kgaonkar6
    kgaonkar6 committed Jan 6, 2020
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  2. Merge branch 'validation_step' of https://github.com/kgaonkar6/OpenPB… 

    …TA-analysis into validation_step
    @kgaonkar6
    kgaonkar6 committed Jan 6, 2020
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  3. keep only ids from clinical

    @kgaonkar6
    kgaonkar6 committed Jan 6, 2020
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Commits on Jan 7, 2020

  1. Merge branch 'master' into validation_step

    @jaclyn-taroni
    jaclyn-taroni authored Jan 7, 2020
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Commits on Jan 8, 2020

  1. Run black

    @jaclyn-taroni
    jaclyn-taroni committed Jan 8, 2020
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  2. Change names to reflect current study

    @jaclyn-taroni
    jaclyn-taroni committed Jan 8, 2020
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  3. Add documentation

    @jaclyn-taroni
    jaclyn-taroni committed Jan 8, 2020
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  4. Merge branch 'master' into validation_step

    @jaclyn-taroni
    jaclyn-taroni authored Jan 8, 2020
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Commits on Jan 9, 2020

  1. @gwaygenomics suggested doc changes

    @jaclyn-taroni
    jaclyn-taroni committed Jan 9, 2020
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  2. Merge branch 'master' into validation_step

    @jaclyn-taroni
    jaclyn-taroni authored Jan 9, 2020
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  3. Merge branch 'master' into validation_step

    @jaclyn-taroni
    jaclyn-taroni authored Jan 9, 2020
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  4. Update README.md

    @jaclyn-taroni
    jaclyn-taroni authored Jan 9, 2020
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Commits on Jan 10, 2020

  1. Merge branch 'master' into validation_step

    @jaclyn-taroni
    jaclyn-taroni authored Jan 10, 2020
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