singular project

and normalize tokenization
AlexsLemonade · May 29, 2024 · 0a54ae9 · 0a54ae9
1 parent 7d6ba20
commit 0a54ae9
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/main.nf b/main.nf
@@ -30,7 +30,7 @@ workflow test {
 }
 
 workflow simulate {
-  project_ids = params.project?.tokenize(',') ?: []
+  project_ids = params.project?.tokenize(';, ') ?: []
   run_all = project_ids.isEmpty() || project_ids[0].toLowerCase() == 'all'
 
   project_ch = Channel.fromPath(Utils.getProjectPaths(release_dir))

diff --git a/nextflow.config b/nextflow.config
@@ -50,7 +50,7 @@ profiles {
       release_prefix = "test"
       release_bucket = "s3://openscpca-test-data-release-public-access" // test bucket
       results_bucket = "test/results" // local output
-      projects = "SCPCP000012" // a small project
+      project = "SCPCP000012" // a small project
     }
   }
   batch {