-log has to be before run

AlexsLemonade · May 29, 2024 · 4d7aed8 · 4d7aed8
1 parent 55875dc
commit 4d7aed8
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/.github/workflows/nextflow-stub-check.yml b/.github/workflows/nextflow-stub-check.yml
@@ -18,12 +18,12 @@ jobs:
       - name: Check main workflow
         uses: docker://nextflow/nextflow:24.04.2
         with:
-          args: nextflow run main.nf -stub -profile stub -ansi-log false -log stub-run.log
+          args: nextflow -log stub-run.log run main.nf -stub -profile stub -ansi-log false
 
       - name: Check simulate workflow
         uses: docker://nextflow/nextflow:24.04.2
         with:
-          args: nextflow run main.nf -stub -profile stub -ansi-log false -entry simulate -log simulate-run.log
+          args: nextflow -log simulate-run.log run main.nf -stub -profile stub -ansi-log false -entry simulate
 
       - name: Join log files
         if: ${{ !cancelled() }}