Merge pull request #483 from AlexsLemonade/sjspielman/481-split-up-ce…

…lltypes-qc Split up cell types QC report
AlexsLemonade · Oct 5, 2023 · 2fe22d8 · 2fe22d8
2 parents 3c21045 + 1a6bc74
commit 2fe22d8
Show file tree

Hide file tree

Showing 6 changed files with 658 additions and 531 deletions.
diff --git a/.gitignore b/.gitignore
@@ -9,7 +9,8 @@ scpca-references/
 
 
 # ignore template htmls
-qc_report.html
+main_qc_report.html
+celltypes_supplemental_report.html
 *_qc.html
 
 # ignore hidden `DS_Store`

diff --git a/main.nf b/main.nf
@@ -26,7 +26,7 @@ cellhash_techs = single_cell_techs.findAll{it.startsWith('cellhash')}
 
 // report template path
 report_template_dir = file("${projectDir}/templates/qc_report", type: 'dir')
-report_template_file = "qc_report.rmd"
+report_template_file = "main_qc_report.rmd"
 report_template_tuple = tuple(report_template_dir, report_template_file)