Adaptive haplotype assembly for efficiently leveraging high coverage in long reads
If you use HapCHAT, please cite:
Stefano Beretta*, Murray Patterson*, Simone Zaccaria, Gianluca Della Vedova and Paola Bonizzoni. HapCHAT: adaptive haplotype assembly for efficiently leveraging high coverage in long reads. BMC Bioinformatics, 19(1):252 (2018). *Joint first authors
DOI: 10.1186/s12859-018-2253-8
Instructions on how to install and use HapCHAT are on the website http://hapchat.algolab.eu