Adding overwrite_config option to build_env_pointnet() and merging 2024 bmtk-workshop opt tutorials #115

	name: Unit Tests
	on:
	pull_request:
	branches:
	- develop
	- release/**
	paths:
	- bmtk/**
	- .github/workflows/**

	jobs:
	run-tests:
	runs-on: ${{ matrix.os }}
	strategy:
	matrix:
	os: [ubuntu-20.04]
	python-version: ["3.6", "3.7", "3.8", "3.9"]

	steps:
	- uses: actions/checkout@v2

	- name: Install Python
	uses: actions/setup-python@v4
	with:
	python-version: ${{ matrix.python-version }}

	- name: Install Requirements
	run: \|
	pip install -r test_requirements.txt
	pip install neuron==8.0.0
	pip install .

	- name: Check NRN mechanisms directory exists
	id: has_mechanisms_dir
	uses: andstor/file-existence-action@v1
	with:
	files: bmtk/tests/simulator/bionet/components/mechanisms

	- name: Setup NEURON
	if: steps.has_mechanisms_dir.outputs.files_exists == 'true'
	run: \|
	cd bmtk/tests/simulator/bionet/components/mechanisms
	nrnivmodl modfiles

	- name: Run Tests
	run: \|
	pytest --cov=bmtk --cov-report=html bmtk/tests

	linter:
	runs-on: ${{ matrix.os }}
	strategy:
	matrix:
	os: [ubuntu-latest]
	python-version: [3.8]

	steps:
	- uses: actions/checkout@v2

	- name: Install Python
	uses: actions/setup-python@v4
	with:
	python-version: ${{ matrix.python-version }}

	- name: Install Requirements
	run: \|
	pip install -r test_requirements.txt

	- name: Run Python Linter
	run: \|
	flake8 bmtk --exit-zero --statistics --count

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