Segmentation-Free Outcome Prediction

Official github repository for the paper "Segmentation-Free Outcome Prediction in Head and Neck Cancer: Deep Learning-based Feature Extraction from Multi-Angle Maximum Intensity Projections (MA-MIPs) of PET Images".

Here is the link to the pre-print Arxiv version: https://arxiv.org/abs/2405.01756

Installation

The code is tested on Windows WSL2 Ubuntu 20.04 and Azure VM Ubuntu 16.04, python 3.8, 3.9, and 3.10

To start, please make a conda environment using the environment.yml file provided:

conda env create -f environment.yml

Acknowledgement

The code is heavily borrowed from this repository.