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@AndersenLab

Andersen Lab

Johns Hopkins University

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  1. CAENDR CAENDR Public

    HTML 4 3

Repositories

Showing 10 of 182 repositories
  • wi-gatk Public

    The new GATK-based pipeline for wild isolate C. elegans strains

    AndersenLab/wi-gatk’s past year of commit activity
    Nextflow 1 3 6 0 Updated Dec 12, 2024
  • andersenlab.github.io Public

    Andersen Lab Website

    AndersenLab/andersenlab.github.io’s past year of commit activity
    HTML 2 MIT 3 0 2 Updated Dec 9, 2024
  • easyXpress Public

    easyXpress is an R package for the analysis and visualization of high-throughput image-based nematode data

    AndersenLab/easyXpress’s past year of commit activity
    HTML 2 MIT 2 11 0 Updated Dec 5, 2024
  • post-gatk-nf Public

    Subset isotype-only vcf, build tree etc. steps after variant calling and isotype assignment

    AndersenLab/post-gatk-nf’s past year of commit activity
    Nextflow 2 1 0 0 Updated Dec 5, 2024
  • NemaScan Public

    GWA Mapping and Simulation with C. elegans, C. tropicalis, and C. briggsae

    AndersenLab/NemaScan’s past year of commit activity
    R 2 4 8 0 Updated Dec 5, 2024
  • cv Public

    Andersen Curriculum Vitae

    AndersenLab/cv’s past year of commit activity
    0 1 0 0 Updated Dec 2, 2024
  • nil-ril-nf Public

    Nextflow pipeline for calling NILs and RILs

    AndersenLab/nil-ril-nf’s past year of commit activity
    Nextflow 0 MIT 2 0 0 Updated Dec 2, 2024
  • pathogenDiscovery-sh Public

    C. elegans pathogen discovery through taxonomic classification from unaligned wild strains reads

    AndersenLab/pathogenDiscovery-sh’s past year of commit activity
    Shell 0 0 0 0 Updated Nov 19, 2024
  • cellprofiler-nf Public

    A nextflow pipeline to run CellProfiler pipelines on raw images and process output

    AndersenLab/cellprofiler-nf’s past year of commit activity
    Nextflow 1 MIT 2 6 (1 issue needs help) 1 Updated Nov 9, 2024
  • miRNA_variant_filter-sh Public

    Tabor Roderiques Rotation Project, filtering C elegans WI.20231213.hard-filter.isotype.vcf.gz for variants in miRNA genes and 3' UTR mRNA predicted binding sites

    AndersenLab/miRNA_variant_filter-sh’s past year of commit activity
    Shell 0 0 0 0 Updated Nov 7, 2024
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