Create compare reference #36
Workflow file for this run
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| name: Create compare reference | |
| on: | |
| push: | |
| tags: | |
| - 'ammr-*' | |
| workflow_dispatch: | |
| inputs: | |
| git_reference: | |
| description: 'Which Git reference to check out. Examples: "refs/tags/v0.2.1", "refs/heads/master".' | |
| default: refs/tags/vX.Y.Z | |
| required: true | |
| concurrency: | |
| group: compare-test-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| runs-on: [self-hosted, AnyBody] | |
| strategy: | |
| fail-fast: false | |
| steps: | |
| - name: Set variables | |
| env: | |
| DEFAULT_GIT_REFERENCE: refs/heads/master | |
| run: | | |
| $GIT_REFERENCE="${{ github.event.inputs.git_reference || env.DEFAULT_GIT_REFERENCE }}" | |
| echo "GIT_REFERENCE=$GIT_REFERENCE" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append | |
| echo "COMPARE_TEST_NAME=$($GIT_REFERENCE.replace("/","-"))" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append | |
| - name: Checkout repository at ${{ env.GIT_REFERENCE }} | |
| uses: actions/checkout@v3 | |
| with: | |
| ref: ${{ env.GIT_REFERENCE }} | |
| fetch-depth: 0 | |
| - name: Install conda | |
| run: | | |
| Invoke-Webrequest -URI https://anybodycloudci.blob.core.windows.net/micromamba/micromamba-0.25.1-0.tar.bz2 -OutFile ~\micromamba.tar.bz2 | |
| (Get-FileHash ~\micromamba.tar.bz2).hash -eq "ED3B12B747F05A630198D3A8A8F7120BDE22AE9033CB62AF95D6F3DF57FE9B0C" | |
| $env:Path = "C:\PROGRA~1\Git\usr\bin;" + $env:Path | |
| tar -xvjf ~/micromamba.tar.bz2 --strip-components 2 -C ~ Library/bin/micromamba | |
| echo "MAMBA_ROOT_PREFIX=$HOME\micromamba" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append | |
| - name: Create conda environment | |
| run: | | |
| ~\micromamba.exe shell hook -s powershell | Out-String | iex | |
| micromamba create --allow-downgrade -y -n _ammr_test -f Tests\test-environment.yml | |
| - name: Store AMS Version | |
| run: | | |
| ~\micromamba.exe shell hook -s powershell | Out-String | iex | |
| micromamba activate _ammr_test | |
| $AMS_VERSION = $(python -c "import anypytools; print(anypytools.tools.anybodycon_version())") | |
| echo "AMS_VERSION=$AMS_VERSION" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append | |
| - name: Run test for compare | |
| run: | | |
| ~\micromamba.exe shell hook -s powershell | Out-String | iex | |
| micromamba activate _ammr_test | |
| pytest --runslow --anytest-output=${{runner.temp}} --anytest-name=${{ env.GIT_REFERENCE }} Tests | |
| - name: Compress compare data | |
| working-directory: ${{runner.temp}} | |
| run: | | |
| Compress-Archive -Force -Path ${{ env.GIT_REFERENCE }}/* -DestinationPath compare-data.zip | |
| - name: Create Upload script | |
| working-directory: ${{runner.temp}} | |
| run: | | |
| $script = @" | |
| import os | |
| import sys | |
| from azure.storage.blob import BlobServiceClient | |
| version = os.environ["AMS_VERSION"].partition(" (")[0].replace(" ", "") | |
| container_name = f"ams-{version.replace('.','-')}" | |
| blob_name = os.environ["AZURE_BLOB_NAME"] | |
| container_client = BlobServiceClient.from_connection_string( | |
| os.environ["AZURE_CONN_STR"] | |
| ).get_container_client(container_name) | |
| if not container_client.exists(): | |
| container_client.create_container() | |
| with open(sys.argv[1], "rb") as fh: | |
| container_client.upload_blob(blob_name, fh, overwrite=True) | |
| "@ | Set-Content -Path "upload.py" | |
| - name: Upload to azure | |
| working-directory: ${{runner.temp}} | |
| env: | |
| AZURE_CONN_STR: ${{ secrets.AZURE_CONN_STR }} | |
| AZURE_BLOB_NAME: ${{ env.COMPARE_TEST_NAME }} | |
| run: | | |
| ~\micromamba.exe shell hook -s powershell | Out-String | iex | |
| micromamba create -y -q -c conda-forge -n _azure-storage-blob azure-storage-blob | |
| micromamba activate _azure-storage-blob | |
| echo $env:AZURE_BLOB_NAME | |
| echo $env:AZURE_CONTAINER_NAME | |
| python upload.py compare-data.zip | |