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@CALeDNA

CALeDNA

Citizen and community science based environmental DNA biodiversity surveys

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  1. caledna caledna Public

    Rails app that handles the data management flow for CALeDNA.

    Ruby 2

  2. caledna-squarespace caledna-squarespace Public

    Files for the CALeDNA Squarespace site

    Less 1

  3. eDNA-metadata eDNA-metadata Public

    Forked from emlys/eDNA-metadata

    Jupyter Notebook 1

  4. ranacapa ranacapa Public

    Forked from gauravsk/ranacapa

    R package for downstream analysis for anacapa eDNA pipeline

    R 1

  5. Klamath-mountains Klamath-mountains Public

    Forked from beraute/Klamath-mountains

    Klamath mountains genus interaction data repository compatible with globalbioticinteractions.org

    1

  6. Anacapa Anacapa Public

    Forked from limey-bean/Anacapa

    Written by Emily Curd (eecurd@g.ucla.edu), Jesse Gomer (jessegomer@gmail.com), Gaurav Kandlikar (gkandlikar@ucla.edu), Zack Gold (zjgold@ucla.edu), Max Ogden (max@maxogden.com), Lenore Pipes (lpipe…

    Python 1 1

Repositories

Showing 10 of 15 repositories
  • Anacapa Public Forked from limey-bean/Anacapa

    Written by Emily Curd (eecurd@g.ucla.edu), Jesse Gomer (jessegomer@gmail.com), Gaurav Kandlikar (gkandlikar@ucla.edu), Zack Gold (zjgold@ucla.edu), Max Ogden (max@maxogden.com), Lenore Pipes (lpipes@berkeley.edu)and Baochen Shi (biosbc@gmail.com). Assistance was provided by Rachel Meyer (rsmeyer@ucla.edu).

    CALeDNA/Anacapa’s past year of commit activity
    Python 1 MIT 19 0 2 Updated Jul 24, 2024
  • t-rex-monitor Public

    T-REX job scheduler and metrics visualizer

    CALeDNA/t-rex-monitor’s past year of commit activity
    Shell 0 MIT 0 0 0 Updated Feb 20, 2024
  • crux Public Forked from UCcongenomics/CRUX_Creating-Reference-libraries-Using-eXisting-tools

    Pipeline For Creating eDNA Reference Libraries

    CALeDNA/crux’s past year of commit activity
    Shell 0 8 4 0 Updated Feb 20, 2024
  • taxid2taxonpath Public Forked from lpipes/taxid2taxonpath

    converts taxids to taxonpaths

    CALeDNA/taxid2taxonpath’s past year of commit activity
    Python 0 2 0 0 Updated Jan 28, 2024
  • caledna Public

    Rails app that handles the data management flow for CALeDNA.

    CALeDNA/caledna’s past year of commit activity
    Ruby 2 MIT 0 0 46 Updated Jan 19, 2023
  • eDNA_Explorer Public Forked from levisimons/ecoDASH

    Code repository for the ecoDASH project

    CALeDNA/eDNA_Explorer’s past year of commit activity
    R 0 1 0 0 Updated Jul 11, 2022
  • POUR Public
    CALeDNA/POUR’s past year of commit activity
    0 0 0 0 Updated Apr 30, 2021
  • caledna-squarespace Public

    Files for the CALeDNA Squarespace site

    CALeDNA/caledna-squarespace’s past year of commit activity
    Less 1 0 0 0 Updated Nov 1, 2020
  • trait-scripts Public Forked from emlys/trait-scripts

    assorted scripts related to species trait data

    CALeDNA/trait-scripts’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Oct 30, 2020
  • TaxonListToOpenTreePhylogeny Public Forked from McTavishLab/OT2020

    This is a Jupyter Notebook to make phylogenetic trees with the Open Tree of Life from a list of taxa such as those from Anacapa output (CALeDNA format)

    CALeDNA/TaxonListToOpenTreePhylogeny’s past year of commit activity
    Jupyter Notebook 0 2 0 0 Updated Jun 17, 2020
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