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fix: filter out generic patient IDs #2947

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merged 1 commit into from
Nov 21, 2024
Merged

fix: filter out generic patient IDs #2947

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2 changes: 1 addition & 1 deletion containers/ecr-viewer/src/app/api/fhirPath.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@ patientPhoneNumbers: "Bundle.entry.resource.where(resourceType = 'Patient').tele
patientEmails: "Bundle.entry.resource.where(resourceType = 'Patient').telecom.where(system = 'email')"
patientCounty: "Bundle.entry.resource.where(resourceType = 'Patient').address.first().county"

patientIds: "Bundle.entry.resource.where(resourceType = 'Patient').identifier"
patientIds: "Bundle.entry.resource.where(resourceType = 'Patient').identifier.where(system != 'urn:ietf:rfc:3986').value.join('\n')"
patientDOB: "Bundle.entry.resource.where(resourceType = 'Patient').birthDate"
patientVitalStatus: "Bundle.entry.resource.where(resourceType = 'Patient').deceasedBoolean"
patientDOD: "Bundle.entry.resource.where(resourceType = 'Patient').deceasedDate"
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19 changes: 1 addition & 18 deletions containers/ecr-viewer/src/app/services/evaluateFhirDataService.ts
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Expand Up @@ -3,7 +3,6 @@ import {
CodeableConcept,
Condition,
Encounter,
Identifier,
Location,
Organization,
PatientContact,
Expand Down Expand Up @@ -350,7 +349,7 @@ export const evaluateDemographicsData = (
title: "Patient IDs",
toolTip:
"Unique patient identifier(s) from their medical record. For example, a patient's social security number or medical record number.",
value: evaluateIdentifiers(fhirBundle, mappings.patientIds),
value: evaluateValue(fhirBundle, mappings.patientIds),
},
];
return evaluateData(demographicsData);
Expand Down Expand Up @@ -621,22 +620,6 @@ export const evaluateValue = (entry: Element, path: string): string => {
return value.trim();
};

/**
* Evaluate the identifiers string and return in a formatted list.
* @param fhirBundle The FHIR resource to evaluate.
* @param path The path within the resource to extract the value from.
* @returns Formatted string of identifiers
*/
export const evaluateIdentifiers = (fhirBundle: Bundle, path: string) => {
const identifiers = evaluate(fhirBundle, path) as Identifier[];

return identifiers
.map((identifier) => {
return `${identifier.value}`;
})
.join("\n");
};

/**
* Find facility ID based on the first encounter's location
* @param fhirBundle - The FHIR bundle containing resources.
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4 changes: 4 additions & 0 deletions containers/ecr-viewer/src/app/tests/assets/BundlePatient.json
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Expand Up @@ -19,6 +19,10 @@
{
"system": "urn:oid:2.16.840.1.113883.3.3316.100",
"value": "10308625"
},
{
"system": "urn:ietf:rfc:3986",
"value": "urn:uuid:2.16.840.1.114222.4.3.4.52.2"
}
],
"name": [
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3 changes: 1 addition & 2 deletions containers/ecr-viewer/src/app/tests/services/evaluateFhirDataServices.test.ts
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Expand Up @@ -2,7 +2,6 @@ import { loadYamlConfig } from "@/app/api/utils";
import {
evaluateEncounterId,
evaluateFacilityId,
evaluateIdentifiers,
evaluatePatientRace,
evaluatePatientEthnicity,
evaluatePractitionerRoleReference,
Expand Down Expand Up @@ -97,7 +96,7 @@ describe("evaluate value", () => {

describe("Evaluate Identifier", () => {
it("should return the Identifier value", () => {
const actual = evaluateIdentifiers(
const actual = evaluateValue(
BundleWithPatient as unknown as Bundle,
mappings.patientIds,
);
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