Skip to content

Actions: Clinical-Genomics/microSALT

Actions

All workflows

Actions

Loading...
Loading

Showing runs from all workflows
127 workflow runs
127 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

Add back more greedy elimination of similar results Tests #70: Commit 4fdc651 pushed by samuell
November 5, 2024 17:07 4m 18s 185-fix-duplicate-resistance-rows
185-fix-duplicate-resistance-rows
November 5, 2024 17:07 4m 18s
Merge pull request #178 from Clinical-Genomics/rc400 (major) Tests #69: Commit 9c5a407 pushed by samuell
November 5, 2024 17:03 3m 51s 185-fix-duplicate-resistance-rows
185-fix-duplicate-resistance-rows
November 5, 2024 17:03 3m 51s
Merge pull request #178 from Clinical-Genomics/rc400 (major) Tests #68: Commit 9c5a407 pushed by karlnyr
October 30, 2024 13:20 6m 30s master
master
October 30, 2024 13:20 6m 30s
Use HTML codes for åäö Tests #67: Commit 8876b53 pushed by samuell
October 11, 2024 09:07 6m 23s rc400
rc400
October 11, 2024 09:07 6m 23s
Use HTML codes for åäö Tests #66: Commit c301d63 pushed by samuell
October 11, 2024 09:05 3m 47s 183-remove-kmer-tackning-col
183-remove-kmer-tackning-col
October 11, 2024 09:05 3m 47s
Fix #183: Remove potentially confusing Kmer täckning column Tests #65: Commit 1d3e907 pushed by samuell
October 11, 2024 09:05 3m 37s 183-remove-kmer-tackning-col
183-remove-kmer-tackning-col
October 11, 2024 09:05 3m 37s
Use HTML codes for åäö Tests #64: Commit 6e06871 pushed by samuell
October 11, 2024 08:36 4m 11s 183-remove-kmer-tackning-col
183-remove-kmer-tackning-col
October 11, 2024 08:36 4m 11s
Remove column width specs on MLST and Resistance tables Tests #63: Commit f372851 pushed by samuell
October 11, 2024 07:41 4m 24s 183-remove-kmer-tackning-col
183-remove-kmer-tackning-col
October 11, 2024 07:41 4m 24s
Fix #183: Remove potentially confusing Kmer täckning column Tests #62: Commit 9a03dad pushed by samuell
October 11, 2024 04:14 3m 37s 183-remove-kmer-tackning-col
183-remove-kmer-tackning-col
October 11, 2024 04:14 3m 37s
Fix missing vim genes (#182) Tests #61: Commit edb9256 pushed by samuell
October 11, 2024 04:09 6m 11s 183-remove-kmer-tackning-col
183-remove-kmer-tackning-col
October 11, 2024 04:09 6m 11s
Fix missing vim genes (#182) Tests #60: Commit edb9256 pushed by samuell
September 20, 2024 15:04 6m 23s rc400
rc400
September 20, 2024 15:04 6m 23s
Remove internal file paths Tests #59: Commit 4c0a3a2 pushed by samuell
September 20, 2024 14:45 3m 22s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
September 20, 2024 14:45 3m 22s
Check if reference_length is set before showing Tests #58: Commit 635de3c pushed by samuell
September 16, 2024 14:05 3m 28s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
September 16, 2024 14:05 3m 28s
Check if reference_length is set before showing Tests #57: Commit 33d00c2 pushed by samuell
September 16, 2024 13:31 4m 37s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
September 16, 2024 13:31 4m 37s
Update testdata to use Skesa output with Spades format Tests #56: Commit 904d97b pushed by samuell
September 13, 2024 15:20 3m 42s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
September 13, 2024 15:20 3m 42s
Fix bug in skesa output file path Tests #55: Commit 78b447f pushed by samuell
September 13, 2024 13:35 4m 18s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
September 13, 2024 13:35 4m 18s
Use original file name for main contig file Tests #54: Commit e2f7f3e pushed by samuell
September 13, 2024 12:50 3m 46s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
September 13, 2024 12:50 3m 46s
Fix it even more Tests #53: Commit bd0a67c pushed by samuell
September 13, 2024 10:38 4m 17s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
September 13, 2024 10:38 4m 17s
Fix f-string backslash error Tests #52: Commit d599a80 pushed by samuell
September 13, 2024 10:34 3m 31s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
September 13, 2024 10:34 3m 31s
Convert sequence naming in Skesa contigs fasta file into Spades format Tests #51: Commit 9df4e18 pushed by samuell
September 13, 2024 10:25 1m 44s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
September 13, 2024 10:25 1m 44s
Simplify creation of contigs file Tests #50: Commit 22525e8 pushed by samuell
September 13, 2024 10:03 4m 18s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
September 13, 2024 10:03 4m 18s
Compute contig lengths with seqkit and write to a tsv file Tests #49: Commit 23d255c pushed by samuell
September 12, 2024 14:59 3m 23s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
September 12, 2024 14:59 3m 23s
Compute contig lenghts with seqkit and write to a tsv file Tests #48: Commit c8f1c09 pushed by samuell
September 12, 2024 14:58 3m 24s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
September 12, 2024 14:58 3m 24s
Write out a file with the contig lengths Tests #47: Commit 3ab61a0 pushed by samuell
September 12, 2024 14:44 6m 6s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
September 12, 2024 14:44 6m 6s
Don't quench exceptions in scraper Tests #46: Commit a54c085 pushed by samuell
August 26, 2024 14:58 3m 34s 180-fix-missing-vim-genes
180-fix-missing-vim-genes
August 26, 2024 14:58 3m 34s