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MicroSALT uses a timestamp in the output directory name. This means that the path to it cannot be passed to trailblazer when a pending analysis is created. In turn, this means that jobs cannot be tracked for microsalt cases in trailblazer.
We could apply some workaround for the microsalt pipeline, but it makes more sense to change the name of the output dir to follow the structure the rest of the pipelines do. Basically, it should just be the case name (instead of lims project id + random timestamp).
The text was updated successfully, but these errors were encountered:
MicroSALT uses a timestamp in the output directory name. This means that the path to it cannot be passed to trailblazer when a pending analysis is created. In turn, this means that jobs cannot be tracked for microsalt cases in trailblazer.
We could apply some workaround for the microsalt pipeline, but it makes more sense to change the name of the output dir to follow the structure the rest of the pipelines do. Basically, it should just be the case name (instead of lims project id + random timestamp).
The text was updated successfully, but these errors were encountered: