Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jobs cannot be tracked for microsalt #167

Open
seallard opened this issue Jan 15, 2024 · 0 comments
Open

Jobs cannot be tracked for microsalt #167

seallard opened this issue Jan 15, 2024 · 0 comments
Labels

Comments

@seallard
Copy link
Contributor

seallard commented Jan 15, 2024

MicroSALT uses a timestamp in the output directory name. This means that the path to it cannot be passed to trailblazer when a pending analysis is created. In turn, this means that jobs cannot be tracked for microsalt cases in trailblazer.

We could apply some workaround for the microsalt pipeline, but it makes more sense to change the name of the output dir to follow the structure the rest of the pipelines do. Basically, it should just be the case name (instead of lims project id + random timestamp).

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Projects
None yet
Development

No branches or pull requests

1 participant