Suggested changes to indices post consult session

CHANGELOG.md

@@ -8,6 +8,8 @@ About changelog [here](https://keepachangelog.com/en/1.0.0/)
 ### Fixed
 - Command line crashing with error when updating a user that doesn't exist
 - Thaw coloredlogs - 15.0.1 restores errorhandler issue
+- Optimised indexes to address slow queries
+
 
 ## [4.75]
 ### Added

scout/constants/indexes.py

@@ -30,23 +30,15 @@
         ),
     ],
     "variant": [
-        IndexModel(
-            [
-                ("case_id", ASCENDING),
-                ("category", ASCENDING),
-                ("variant_rank", ASCENDING),
-            ],
-            name="caseid_variantrank",
-            background=True,
-        ),
         IndexModel(
             [
                 ("case_id", ASCENDING),
                 ("category", ASCENDING),
                 ("variant_type", ASCENDING),
-                ("rank_score", DESCENDING),
+                ("variant_rank", ASCENDING),
+                ("hgnc_ids", ASCENDING),
             ],
-            name="caseid_category_varianttype_rankscore",
+            name="caseid_category_varianttype_variantrank_hgncids",
             background=True,
         ),
         IndexModel(
@@ -62,11 +54,11 @@
         ),
         IndexModel(
             [
+                ("variant_id", ASCENDING),
                 ("case_id", ASCENDING),
                 ("category", ASCENDING),
-                ("variant_id", ASCENDING),
             ],
-            name="caseid_variantid",
+            name="caseid_variantid_caseid_category",
             background=True,
         ),
         IndexModel(