Pulse-Adjoint is an extension of the pulse library for doing data assimilation for cardiac mechanics applications.
This is a full rewriting of the code in the following repo. Note that the version in this repo is experimental and might contain several bugs. If you encounter bugs we would appreciate if you could file an issue.
Before installing pulse-adjoint you need to install FEniCS See https://pulse-adjoint.readthedocs.io/en/latest/installation.html
Documentation can be found at https://pulse-adjoint.readthedocs.io/
You can create documentation yourselves by typing make docs in the
root directory.
Check out the demos in the demo folder.
Test are provided in the folder tests. You can run the test
with pytest
python -m pytest tests -vv
You can also type
make test
which with run the test and generate a coverage report. You can have a look at the coverage report if you type
make coverage
Tests are run in continuous integration using circle ci and a coverage report is automatically generated
LGPL version 3 or later
This package was created with Cookiecutter and the finsberg/cookiecutter-pypackage project template.