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@EDS-Bioinformatics-Laboratory

Bioinformatics Laboratory

Bioinformatics & Computational modelling

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  1. ENCORE ENCORE Public

    ENCORE: Enhancing Computational Reproducibility

    Python 4

  2. ENCORE_AUTOMATION ENCORE_AUTOMATION Public

    ENCORE_AUTOMATION

    HTML

  3. FSS-Navigator FSS-Navigator Public

    Antoine van Kampen, Aldo Jongejan, Utkarsh Mahamune: The standardized file system structure (FSS) navigator

    HTML

  4. ENCORE-SUPPLEMENT ENCORE-SUPPLEMENT Public

    ENCORE Supplementary Material

    1

  5. ComputingInR ComputingInR Public

    Forked from pdmoerland/ComputingInR

    Perry Moerland: Teaching material for the course Computing in R

    HTML

Repositories

Showing 10 of 17 repositories
  • ENCORE Public

    ENCORE: Enhancing Computational Reproducibility

    EDS-Bioinformatics-Laboratory/ENCORE’s past year of commit activity
    Python 4 0 7 0 Updated Dec 11, 2024
  • scRNASeq_analysis_ANCA Public

    Main scripts used in the analysis of the single-cell RNA-seq data of ANCA-associated glomerulonephritis as described in Vegting et al., 2024

    EDS-Bioinformatics-Laboratory/scRNASeq_analysis_ANCA’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Sep 23, 2024
  • ENCORE_AUTOMATION Public

    ENCORE_AUTOMATION

    EDS-Bioinformatics-Laboratory/ENCORE_AUTOMATION’s past year of commit activity
    HTML 0 0 1 0 Updated Sep 18, 2024
  • ENCORE-SUPPLEMENT Public

    ENCORE Supplementary Material

    EDS-Bioinformatics-Laboratory/ENCORE-SUPPLEMENT’s past year of commit activity
    1 0 1 0 Updated Sep 17, 2024
  • FSS-Navigator Public

    Antoine van Kampen, Aldo Jongejan, Utkarsh Mahamune: The standardized file system structure (FSS) navigator

    EDS-Bioinformatics-Laboratory/FSS-Navigator’s past year of commit activity
    HTML 0 GPL-3.0 0 11 0 Updated Aug 1, 2024
  • zenodo-test-bvs Public

    Test repo to see if a release is automatically added to Zenodo

    EDS-Bioinformatics-Laboratory/zenodo-test-bvs’s past year of commit activity
    Shell 0 GPL-3.0 0 0 0 Updated Jul 29, 2024
  • reseda Public

    Barbera van Schaik, Antoine van Kampen: REpertoire SEquence Data Analysis

    EDS-Bioinformatics-Laboratory/reseda’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Jun 12, 2024
  • ENCORE-AIRRseq-TEMPLATE Public

    Barbera van Schaik, Antoine van Kampen: ENCORE project for analysis for T-cell and B-cell repertoires

    EDS-Bioinformatics-Laboratory/ENCORE-AIRRseq-TEMPLATE’s past year of commit activity
    Python 0 0 0 0 Updated May 31, 2024
  • PhDthesisUmeshNandal Public

    Umesh Nandal, Perry Moerland: additional files for chapters 4 and 5 of the PhD thesis of Umesh Nandal

    EDS-Bioinformatics-Laboratory/PhDthesisUmeshNandal’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Aug 5, 2023
  • Clonal_aRt_visualization Public

    Rodrigo Garcia Valiente: Visual artsy representation of B-cell clonal repertoires using R

    EDS-Bioinformatics-Laboratory/Clonal_aRt_visualization’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Jun 16, 2023
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