Macenko stain augmentation #51
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: tests | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| jobs: | |
| build: | |
| runs-on: ubuntu-20.04 | |
| if: startsWith(github.ref, 'refs/tags/v') != true | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - name: Set up Python 3.6 | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.6 | |
| - name: Install dependencies | |
| run: pip install wheel setuptools | |
| - name: Build wheel | |
| run: python setup.py bdist_wheel | |
| - name: Upload Python wheel | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: Python wheel | |
| path: ${{github.workspace}}/dist/torchstain-*.whl | |
| if-no-files-found: error | |
| test-tf: | |
| needs: build | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ windows-2019, ubuntu-20.04, macos-11 ] | |
| python-version: [ 3.7, 3.8, 3.9 ] | |
| tf-version: [2.7.0, 2.8.0, 2.9.0] | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Download artifact | |
| uses: actions/download-artifact@master | |
| with: | |
| name: "Python wheel" | |
| - name: Install dependencies | |
| run: | | |
| pip install tensorflow==${{ matrix.tf-version }} protobuf==3.20.* opencv-python-headless scikit-image | |
| pip install pytest | |
| - name: Install wheel | |
| run: pip install --find-links=${{github.workspace}} torchstain | |
| - name: Run tests | |
| run: pytest -vs tests/test_tf.py | |
| test-torch: | |
| needs: build | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ windows-2019, ubuntu-20.04, macos-11 ] | |
| python-version: [ 3.6, 3.7, 3.8, 3.9 ] | |
| pytorch-version: [1.8.0, 1.9.0, 1.10.0, 1.11.0, 1.12.0, 1.13.0] | |
| exclude: | |
| - python-version: 3.6 | |
| pytorch-version: 1.11.0 | |
| - python-version: 3.6 | |
| pytorch-version: 1.12.0 | |
| - python-version: 3.6 | |
| pytorch-version: 1.13.0 | |
| steps: | |
| - uses: actions/checkout@v1 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Download artifact | |
| uses: actions/download-artifact@master | |
| with: | |
| name: "Python wheel" | |
| - name: Install dependencies | |
| run: | | |
| pip install torch==${{ matrix.pytorch-version }} torchvision opencv-python-headless scikit-image | |
| pip install pytest | |
| - name: Install wheel | |
| run: pip install --find-links=${{github.workspace}} torchstain | |
| - name: Run tests | |
| run: pytest -vs tests/test_torch.py |