Add reinhard color normalization support #25
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Note that I also added TF support now, as I need it for one of my studied. Will not have time for PyTorch any time soon, but at least both Numpy and TF backends work as intended. |
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Thanks for the contribution! Merging it now |
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I have added support for reinhard color normalization, as an alternative to Macenko, as discussed in #24.
Reinhard itself was straight forward to implement, but I had a hard time getting the RGB/LAB color converters to work as intended. After looking at what OpenCV, Scikit-Image, and other projects were doing, I managed to implement numpy-equivalents. In the end, from qualitative assessment, I get the same results as another commonly used library, StainTools.
Have not had the time to benchmark it yet, hence,
experimental, but at least it runs and serves as an alternative method.UPDATE: Now both Numpy and TensorFlow backends are supported!
What's changed:
ReinhardNormalizer- currently supports both numpy and tensorflow backends.rgb2labandlab2rgbcolor conversion implementations.statsandsplit.experimental Reinhard supportwith reference to original article.result.pngtodata/directory and updated corresponding path in README.