Release after code changes from peer-reviewed publication, I2K workshop, and user feedback.
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changes 17.10.2020
- line 397 deselection of pointROI for TH/density/surface
- minor GUI changes to make it more intuitive
- closing edge tiff
- line 563 "TH_template" to "template"
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changes 26.10.2020
- correct histogram count [allow 0 or 255 to be vascular; whichever is smaller]
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changes 02.12.2020
- FScale over-write issue; write selected input and output folder into Log;
- only print the steps that were selected into log
- more user feedback needed to decide whether to write MIPs into seperate folder;
- ToDo Mac vs windows - Mac doesn't show "input folder" etc;
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changes 15.08.2021 (Thanks to Nick Condon - Github comments)
- file name input with and without space
- line 197 - falsely included link to github
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changes 19.01.2021 (Thanks to Guy Malkinson - pers comm)
- line 197 - falsely included link to github
- solved issue with downsampling after segmentation without ROI
- 512x512 (x,y) downsampling was hard-coded > needs to be made user input